Nothobranchius furzeri (turquoise killifish): 107391463
Entry
107391463 CDS
T05163
Gene name
hdac6
Definition
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
nfu01009
]
107391463 (hdac6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nfu03019
]
107391463 (hdac6)
04131 Membrane trafficking [BR:
nfu04131
]
107391463 (hdac6)
03036 Chromosome and associated proteins [BR:
nfu03036
]
107391463 (hdac6)
Enzymes [BR:
nfu01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
107391463 (hdac6)
Protein phosphatases and associated proteins [BR:
nfu01009
]
Protein Ser/ Thr phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
107391463 (hdac6)
Messenger RNA biogenesis [BR:
nfu03019
]
Eukaryotic Type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
107391463 (hdac6)
Membrane trafficking [BR:
nfu04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
107391463 (hdac6)
Chromosome and associated proteins [BR:
nfu03036
]
Eukaryotic Type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
107391463 (hdac6)
SSDB
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
Other DBs
NCBI-GeneID:
107391463
NCBI-ProteinID:
XP_015824265
UniProt:
A0A1A8U4B6
LinkDB
Position
sgr15
AA seq
1074 aa
MQAGSEPPGPGLKSARRSPRLSSQASSCEEREKEEDRRSLQEVKRRGRMERSREQQEEEL
SGKLKTLDLSSRAAASGTGLVYSEIFTHHQNLWDPCHPESPDRILSIMAELKKQELLGVC
VLVEPREATDEELLLAHTKPYISMIESTQTMTQQELQMLSDKYDSVYLHPESFQVGVTAV
GSVLQLVDQVMTSELRNGFAVIRPPGHHAESNEPNGYCVFNNVAIAARYAQTHHAVRRVL
IVDWDVHHGQGLQHQFQEDPSVLYFSVHRYENGSFWPHLPESDCSFTGTGRAEGRTVNLA
WNQTGMTDADYITAFQQVLLPVAFEFQPELVLVSAGFDAAVRDPKGEMCVSPQCFHILTH
MLMSLAEGRLVLALEGGYNLQTTAESVVACIRALLGGACPHLDTPPAPSDSALESISQTV
SALIPHWASLQVLGGSLAEGDVIRASTGERSVTIANRSPSVTTTTGLVYDERMMEHMNLW
DRHHPEQPQRIFKIFSKHQQLGLVDRCQQIPSRLATEEELAMCHSKQHIELMKATAEMKP
RDLQRLGDEFNSIFINNQSFQCAQLAAGSCFNAVDSILSGQVSNGVAIVRPPGHHAERDV
PCGFCLFNTAALAARHAQNVVRHSRLRVLILDWDVHHGNGTQHMFEEDDSVLYVSLHRYD
NGMFYPSSEDGAPNKVGVAKGVGFNVNVAWSGGRMGDSDYLAAFHHVVMPIAREFNPDLV
LVSAGFDAARGDPLGGYNVTPAGYAHLTHMLMSLAGGRVLLILEGGYNLTSISDSMAMCT
SVLLGDPPPSLSMPLPPPHYGAVKTIVEVIQNHAPYWKSLRIHVPESVLMSLSSPEHRRK
RSSKGKGRKSDQLPPPPETEVSTTAHDLEQLAQGLADLDISQASASQPPPVTSTPVGGAR
TKVRLSSEVKGLKKVESEVSPATESVLAQSIAGAEAELEAAGACGYSKPEVSLELTCGAE
TTLYCVNPLTWCPHLDAVKPLPPSGVDIFAQCEDCSSDSENWICLTCYQVYCGRYVNEHM
VVHGTASEHPMVLSLSDLSVWCYLCESYVYNQVLFEARNAAHFAKFGEEVPPQS
NT seq
3225 nt
+upstream
nt +downstream
nt
atgcaggctggatcagaacctccaggacctggactcaagtccgccagaaggtcgcctcgt
ctatcttcacaggcttccagctgtgaagaacgagagaaggaggaggacagacgcagcctg
caggaggtgaagaggagaggtaggatggagaggagcagagagcagcaggaggaggagctg
agcggcaagctgaagacgctggatctgtccagcagggctgctgccagtggaaccggtctg
gtttactccgagatcttcacgcaccatcagaacctgtgggatccttgtcacccggagagt
ccggaccgcattctgtccatcatggcggagctgaagaagcaggagctgctgggtgtgtgt
gttctagtggagcccagagaagctacagacgaagagctgctgctcgcgcatacgaaacct
tacatcagcatgatagagtcgacccagaccatgactcagcaagagctccagatgctgtcc
gacaaatacgactcggtttacctccaccctgagtccttccaggtgggtgtgacggctgtt
ggttccgtcctccagctggtcgatcaggtcatgacctctgaactcaggaatggatttgct
gtgatcagacctccaggacaccatgctgagtctaacgagcccaacggttactgcgtgttc
aacaacgtggccatcgcagctcgatacgctcagacccaccacgccgttcgcagggtgttg
atcgtggactgggacgtccatcatggtcaagggctccagcaccagttccaggaggatcca
agcgtcctgtactttagtgtccacaggtatgagaatgggtctttctggcctcacctgccg
gagtcggactgcagcttcactggaacgggacgagctgagggaagaactgtgaacctggcc
tggaaccagacggggatgactgacgctgattacatcacagcattccaacaagttctgctg
cctgttgcctttgaatttcagcctgagctggttctggtctctgctggattcgatgctgca
gtcagagatccgaagggggagatgtgtgtgagtcctcagtgtttccatattctgacccac
atgctgatgagtttggctgaaggacgacttgttctcgctctcgagggaggttataacctg
cagacgacagcagagagtgtagtagcttgcatcagagctctgctgggcggagcttgtcct
catctggacaccccccctgctccctctgatagtgctctcgagtccatctctcagaccgtc
tcagctttgattccacactgggcctcgctgcaagtcctgggcggctcattggctgagggt
gatgtcatcagagcatcaacaggtgagaggagcgtcaccattgctaaccgctccccctcc
gttaccacgacaactggtctagtctatgatgagaggatgatggagcacatgaacctgtgg
gacaggcatcaccccgaacagccgcagagaatatttaagatcttctccaaacaccagcag
ctgggactggtggaccgctgccagcagatcccatctcgcctggcaacggaggaggagctg
gccatgtgccacagcaagcagcacatcgagctgatgaaggccactgcagagatgaagcct
cgagacctccagagactgggagacgagtttaactccatcttcatcaacaaccagagcttc
cagtgcgcccagcttgcagcaggaagctgcttcaatgctgtggacagcatcctgagtgga
caggtgagtaacggagtggccatcgtacgtcctcccggtcatcatgctgagagagacgta
ccctgtggattctgtctcttcaacaccgcggctctggctgcgcgccacgcccaaaatgtc
gttcgccattctcggttgcgagtcttgatcctcgactgggatgttcaccatggcaacggg
actcagcatatgtttgaagaggatgacagcgtcctgtacgtctccctccatcgctatgac
aacggcatgttctacccatcttcagaggacggcgctcctaacaaagtgggagtggccaaa
ggggtgggatttaatgtgaacgtggcttggagcggaggaagaatgggcgactcggactac
ctcgctgcctttcaccatgttgtcatgccgattgcccgagagttcaaccctgatttggtt
ctggtgtctgctgggtttgatgcagctcggggggatccgttgggtggatataatgtgact
cctgcaggatacgcacacctcacacacatgctgatgtcactggctggggggcgtgtccta
ctcatcctggaggggggttataatctaacctccatctctgactccatggcgatgtgcacc
agcgtgttgctaggcgacccaccaccatccttgtccatgccccttccccctccgcattac
ggtgctgtgaaaacaatcgttgaggtaatccagaaccacgccccctactggaagtctctg
aggattcacgttccagagtcagtgctgatgtccctgtcctccccagagcatcgtaggaaa
cgtagttctaaaggaaaaggcagaaagtctgaccaactgccacctcctcctgaaacagag
gtttctacgacggcacacgatctggagcagcttgcacagggattggctgatctagacatc
agtcaagcttcagccagtcagccgcctcctgttacgtccaccccagttggaggagcaagg
acgaaggtccgtctgagttcagaggtcaaaggtcttaaaaaggtggagtcagaggtcagc
ccagcaacagagagtgtgctggctcagagcattgctggagcagaggcggagcttgaggca
gcaggcgcatgtggttattcaaagcccgaggtgtctctggaactgacctgtggtgctgag
accactctttattgtgtcaaccccctgacctggtgtcctcacctggatgctgttaagccc
ctccccccctcaggtgtagacatctttgctcagtgtgaggactgcagctcggattctgag
aactggatctgtctcacctgctaccaggtgtactgtggccgctacgtcaacgagcacatg
gtggttcacggcaccgcgtcggaacatcccatggtgctcagcttgtcggacctgtctgtg
tggtgctacctgtgcgagtcctatgtctacaaccaggttctgtttgaagccagaaacgca
gctcactttgccaagtttggagaggaggtccctccacagagctga
DBGET
integrated database retrieval system
