KEGG   Nothobranchius furzeri (turquoise killifish): 107394688
Entry
107394688         CDS       T05163                                 
Symbol
sf3b4
Name
(RefSeq) splicing factor 3B subunit 4
  KO
K12831  splicing factor 3B subunit 4
Organism
nfu  Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nfu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107394688 (sf3b4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:nfu03041]
    107394688 (sf3b4)
Spliceosome [BR:nfu03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    107394688 (sf3b4)
 Complex B
    107394688 (sf3b4)
 Complex C
   U2 SnRNP specific factors
    107394688 (sf3b4)
SSDB
Motif
Pfam: RRM_1 RRM_7 OB_RNB
Other DBs
NCBI-GeneID: 107394688
NCBI-ProteinID: XP_015829226
UniProt: A0A1A8UHL7
LinkDB
Position
sgr19:14773011..14775346
AA seq 390 aa
MAAGPISERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVE
FLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTF
SAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKK
DSKGERHGSAAERLLAAQNPLSQADRPHQLFADAPPPPSAQTPLLTAMGPGIPLHGLPPP
GAFPHVPPPGSMPPTMPPSMGMPPSAGTPGPPSSLGGPPAVPPPFAPASMPPGMPQMPMP
PAPPGMVPPPAPPGSARAPPPPSMPPPPMGMPPRAPYGPPMAHPVPPGMRGPPPMPPPGY
GAVPPRPPPFGFQRAPPMPPRPPGAPPRVP
NT seq 1173 nt   +upstreamnt  +downstreamnt
atggcagcgggaccaatttcagaaagaaaccaagatgccaccgtgtatgtcggtggtttg
gatgagaaggtgtcagagccgttgctatgggagctttttctgcaggctggccctgttgtc
aacacacacatgcccaaagatcgggtcacaggtcaacatcaaggttatggatttgtggag
ttcctcagtgaggaagatgctgactatgccattaaaatcatgaacatgattaagctctac
ggcaaaccgattcgcgtgaataaggcctccgcccacaacaaaaacctggatgttggcgct
aatatcttcatcgggaacttggacccggagatcgatgaaaaactgctctacgacacgttc
agtgcttttggcgttattctacaaactccaaagatcatgcgagacccagacaccggcaac
tccaagggttacgccttcatcaactttgccagctttgatgcgtccgacgccgccatcgag
gccatgaatggccagtacctgtgcaaccggcccatcactgtgtcgtacgcgttcaagaaa
gattctaaaggagaacgccatggctcagcggcagagcgactgctagctgcacaaaaccct
ctctcgcaggcagacaggccacatcagctgtttgcagatgctccgcccccaccatctgca
cagacgccactcctaaccgcaatgggccccgggattcctcttcatggtttgccgcctcct
ggtgcctttcctcacgttcctccccctggatcaatgcctccaacgatgcccccttctatg
ggcatgcctccatcagcagggacaccaggtcctccatcttctcttggtggacctccagct
gttcctccacctttcgcaccggccagcatgcctccaggtatgcctcagatgcccatgccg
cctgctcctcctggcatggtgcctccacctgctccaccaggatcggctcgagctccaccg
ccccccagcatgcccccacctcctatgggcatgcctcccagagcaccgtatggacccccc
atggcccaccctgtgcctccaggtatgagaggacctccccccatgcctcctcccggctat
ggtgccgttcctcctcgtccacctccttttggtttccagagagcacctccaatgccacca
agacctcccggtgcccctcctcgggtcccttga

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