Candidatus Nitrososphaera gargensis: Ngar_c18600
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Entry
Ngar_c18600 CDS
T02305
Symbol
endA2
Name
(GenBank) putative tRNA-splicing endonuclease
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
nga
Candidatus Nitrososphaera gargensis
Brite
KEGG Orthology (KO) [BR:
nga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nga03016
]
Ngar_c18600 (endA2)
Enzymes [BR:
nga01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
Ngar_c18600 (endA2)
Transfer RNA biogenesis [BR:
nga03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
Ngar_c18600 (endA2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
tRNA_int_end_N2
Sen15
Motif
Other DBs
NCBI-ProteinID:
AFU58792
UniProt:
K0IKB3
LinkDB
All DBs
Position
complement(1442089..1442700)
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AA seq
203 aa
AA seq
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MSSSATAPPSAQQPFSGSKMSEAEMPSVVEARLAAGGKILVDKTRFQDELRTKGFGEKED
AEYVLKPYEALYLMHTKRLALKNKPGMTFDPLFELLLKYDRNIMTKFLVYRDLRSRGYVA
KEGFGFGNDFRVYDRGEYEKKPAKYVIFGINEGTNTTVKDFASAIDQIERMGKEAVVAVI
ERRGEVIYYKASKMRFTENRYRR
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcatcagcaacagctccgccgagcgcgcagcagccattttctggctctaaaatg
agtgaggccgagatgccatctgtagtagaggcgcggcttgcagcaggcggaaagatactg
gttgacaaaacgcgctttcaggatgagctccgtacaaagggctttggcgaaaaggaagac
gccgaatatgtgctcaagccatacgaggcgctgtacctaatgcacacaaagcgccttgcg
ctcaagaacaaacccggcatgacgtttgacccgctgtttgaattactgctcaaatacgac
aggaacatcatgacaaagtttctggtctaccgagacctgcgaagcaggggctatgtcgca
aaagaggggttcgggtttggcaacgactttcgcgtctacgatcggggcgagtacgagaaa
aagcctgccaagtatgtgatctttggcataaacgaggggacaaacacgactgtcaaggac
tttgcaagcgcaatcgatcagatagaaaggatgggtaaggaagcggtagtagcagtgata
gagcggcgtggcgaagtgatctattacaaggcttccaagatgcgattcacggaaaacagg
tatcgccgctaa
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