KEGG   Nannochloropsis gaditana: NGA_0509620
Entry
NGA_0509620       CDS       T02917                                 
Name
(RefSeq) retinoblastoma binding protein 4
  KO
K10752  histone-binding protein RBBP4
Organism
ngd  Nannochloropsis gaditana
Pathway
ngd03082  ATP-dependent chromatin remodeling
ngd03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:ngd00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    NGA_0509620
   03083 Polycomb repressive complex
    NGA_0509620
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ngd03036]
    NGA_0509620
Chromosome and associated proteins [BR:ngd03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     NGA_0509620
  Histone modification proteins
   HAT complexes
    HATB complex
     NGA_0509620
   HDAC complexes
    Sin3A-HDAC complex
     NGA_0509620
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     NGA_0509620
    PRC2.2
     NGA_0509620
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     NGA_0509620
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    NGA_0509620
  Chromatin remodeling factors
   NuRD complex
    NGA_0509620
   NuRF complex
    NGA_0509620
   NuRF complex (fruit fly)
    NGA_0509620
SSDB
Motif
Pfam: WD40 CAF1C_H4-bd TAF1C_beta-prop
Other DBs
NCBI-GeneID: 17360693
NCBI-ProteinID: XP_005853921
UniProt: K8Z9S4
LinkDB
Position
Unknown
AA seq 421 aa
MAETDAPDQERQDEAQDKMIAEEYKIWKKNSPFLYDLVMTHALEWPSLTVQWLPGVKTAE
NNPEYATHKLLFGTHTAAGEQNYLIQANVNLPLPDTEIDAKKYEDERGEVGGFGGMNCKV
EVKVKIAHEGEVNRARYMPQNPFVVATKGPSADVFVFDITKHPSAPGPNDSFRPEHVCKG
HAREGYGLAWSPAAPGQLLSGSDDARVCLWDMTQAGRMVEEVRVFRGHTSVVEDVAWHSA
HPHLFGSVSDDKSLALWDVRESGSQPSHARAGAHEDFVNCLSFSPHSDFLFLTGSADRSV
RLWDLRSLSAPLHTFEGHEDEVFQVKWAPFHENVFASCGADRRVNVWDIAKIGEEQSQED
AADGPPELLFIHGGHTAKVSDLAWNEEDPWVVASVAEDNILQIWQMADNIYMMEEEEEEM
G
NT seq 1263 nt   +upstreamnt  +downstreamnt
atggcggagacggacgctccagaccaggagaggcaagacgaggctcaagacaagatgatt
gccgaggagtacaagatctggaaaaagaactccccatttctttacgacctagtcatgaca
cacgccctggaatggccgtcactgaccgtgcaatggcttcctggtgtaaaaacggcggag
aacaaccctgaatacgcgacgcacaagctcttgtttgggacgcacaccgcggcgggggaa
cagaactacctaattcaagccaacgtgaacttgcccttaccggacacagagatcgacgcc
aagaagtacgaggacgaacgcggggaggtggggggcttcggaggtatgaactgcaaggtg
gaggtgaaggtgaagatcgcgcacgagggggaggtgaaccgggcccgatacatgccgcag
aaccccttcgtggtcgccaccaagggcccgagcgccgacgtcttcgtcttcgacatcacc
aaacacccgtccgcccccggacccaacgacagcttccggcccgagcacgtttgcaaaggg
cacgcgcgcgagggctacgggttggcctggtcgcctgcggcccccgggcagctcttgagc
gggagcgacgacgcgcgcgtctgtctctgggacatgacccaggcggggaggatggtggag
gaggtgcgagtcttccgggggcacacctcggtggtggaggacgtggcatggcacagcgcc
cacccgcatctcttcggctccgtcagcgacgacaagagcctggcgctctgggacgtccgg
gaaagcgggagccagccctcccacgcccgggcaggggcccacgaggactttgtcaactgc
ctctccttctccccccactcggacttcttgttcctgacgggctcggcggatcggagcgtg
cggctctgggaccttcggagtctgagtgcccctctgcatactttcgagggccacgaggac
gaggtcttccaggtcaagtgggcgccattccacgagaacgtcttcgcctcctgcggcgcg
gaccgacgcgtgaacgtgtgggatattgccaagattggggaggaacagtctcaggaggac
gccgcggacggcccgcccgagttactcttcatccacggggggcacacggccaaggtcagc
gacttggcctggaacgaggaggacccctgggtggtggcgagcgtggcggaggacaacata
ctgcagatatggcagatggccgacaacatatatatgatggaggaggaggaggaggaaatg
ggg

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