KEGG   Nannochloropsis gaditana: NGA_2061700
Entry
NGA_2061700       CDS       T02917                                 
Symbol
SNRNP40
Name
(RefSeq) Prp8 binding protein
  KO
K12857  Prp8 binding protein
Organism
ngd  Nannochloropsis gaditana
Pathway
ngd03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ngd00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    NGA_2061700 (SNRNP40)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ngd03041]
    NGA_2061700 (SNRNP40)
Spliceosome [BR:ngd03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    NGA_2061700 (SNRNP40)
 Complex C
   U5 SnRNP specific factors
    NGA_2061700 (SNRNP40)
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 NBCH_WD40 Cytochrom_D1 nos_propeller
Other DBs
NCBI-GeneID: 17363055
NCBI-ProteinID: XP_005856286
UniProt: K8Z322
LinkDB
Position
Unknown
AA seq 356 aa
NTLGIYSMDEGPEDEARRTGADDSALATVPESSGTLAISSAPPAPGRTSHLAASTMLLTG
HAAAVYCLQFNPMGDALATGSFDKTILLWDVYEDCKNYNVLAGHTNAVLDLKWSPNGCQI
ASASADKTLMLWDSNKGTRIRKCKEHTGCVNSVAVAGDKVAALIATASDDRTVKLWDNRS
RRSVQTIEHRFQLLAVALSADGKKVFAGGIDNSIQVWDMAKGPAPLDVLEGHSETVTGLS
LSPDGKYLLSNAMDNTVRQWDVRPFVTGGRLVQVFQGGTHGSDRNLLRCAWSQDGEMVSA
GSADRAVHVWDVPSGQELYYLPGHKGTVNEVVFHPREPVIASASSDKTCYLGELAG
NT seq 1071 nt   +upstreamnt  +downstreamnt
aatactttaggcatctatagcatggatgaaggccctgaggacgaggcaaggcggactggc
gccgatgatagcgccctggccacggttccggagagttccggcacgctggcaataagcagt
gctcccccagccccaggacggacgtcgcacttggccgcatctaccatgcttttgaccggt
catgctgcagccgtgtattgtctgcagttcaatcccatgggggacgctttggcaacgggg
tcttttgataaaacaatattgctgtgggacgtatatgaggattgtaaaaattacaatgta
ctggctgggcatacgaacgctgtgttggatctgaaatggtcgccaaatggttgccaaatc
gcttcggcatcggccgataagacgctcatgttatgggacagcaacaagggcactcggatc
cgtaaatgcaaggagcacactggatgcgtaaacagtgtggccgtggcgggcgacaaagtc
gcggcgttgatagccacggcaagcgacgatcgcactgtgaagctgtgggacaaccgcagc
cggcgatcggttcaaacaatcgagcatcgctttcagttgctggcggtagcgctgtccgcg
gatgggaaaaaggtgttcgcgggcggcatcgacaacagcatccaggtctgggacatggcc
aagggaccggctcctctagacgtgctcgagggccactcggagacggtcacgggcttgagc
ctgagtcccgacggcaagtatttgctgtcgaacgccatggacaacaccgtgcggcagtgg
gacgtgcggccctttgtgacgggagggcggctggtccaggtcttccaaggagggacacac
ggctcggatcgcaacctcttgcgctgcgcctggtcgcaagacggcgagatggtctctgcg
ggctccgcagatcgcgcggttcatgtatgggatgtgccttcgggtcaggagctctactac
ctgccgggacataaagggaccgtaaatgaggtcgtcttccatccccgggagcctgtgata
gcctctgcgtcttcggacaaaacgtgctatttgggggagcttgccggatga

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