Novosphingobium ginsenosidimutans: FRF71_00285
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Entry
FRF71_00285 CDS
T06189
Name
(GenBank) lytic transglycosylase domain-containing protein
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
ngf
Novosphingobium ginsenosidimutans
Brite
KEGG Orthology (KO) [BR:
ngf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ngf01011
]
FRF71_00285
Enzymes [BR:
ngf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
FRF71_00285
Peptidoglycan biosynthesis and degradation proteins [BR:
ngf01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
FRF71_00285
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
Motif
Other DBs
NCBI-ProteinID:
QEA14686
UniProt:
A0A5B8RYP0
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All DBs
Position
62799..64763
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AA seq
654 aa
AA seq
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MSSMVRTTFALLLASLAITPSIASAQDGADWDRARAAQAAAPATPMALAVARWKLLTSSD
RFLFDDYASFLLSYPGFPEEAKLRGYAERALERESLPADRIAAFFDRYPALGNAARARHA
LALFELGRPEAVELGRAVWRGGPMSDLSEAALSARLANVLTPADHDARMDALLWNSNSAQ
ATRQLLYVSPAARLVFLARLGLVNGQDPAAQGLDPGPGVLRDAGYVYNRVRMLRTTGQAA
LASSVMATRPPLAAPPRDARRWIGELLATARRSEAANAVRIAAAIDETFAPGTDVSAQSF
AIRDDYTSLMWLGGTKALYELGDASRAAPLFYRYGAAARSPQTRSKGYYWAGRAMAQAGN
LAEANRYFEMAAIYPEQFYGQLSLERLGRPLPAFNQVPRAVPTAAERAAFNARPLTQAVR
EVARDSDWPTGVRFFREISDQALTEADHVLVADLARELGRRDLAVILAQAAHTDGFGEFH
KTGYPLIPVVAGANWTMVHAITRQESQFAMNAISHAGARGLMQLMPGTAREQAGKLGLEY
SPEALTTDAGYNIMLGDAYFRRMLDYFGGSYPLAVAAYNSGPGNVNKFLRANGDPRNGGI
DWIDWIERIPLTETRGYVQHVLENAVVYEAMNPDKARLGGPNALSRFIGKRNPG
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcatggtccgcacgacatttgctttgctgctggcaagcctggcgataacccct
tcgattgcttcggcgcaggatggtgccgattgggatcgcgcacgcgccgcgcaggctgcc
gccccggccacgccaatggccctggccgtcgcgcggtggaagctgctgaccagttccgat
cgcttcctgttcgacgattacgccagcttcctgctaagctatccaggcttccccgaagag
gccaaactgcgcggctatgccgaacgcgcgctggagcgggaaagcctgccggccgatcgg
atcgcggccttcttcgatcgctatcccgcgctgggcaatgccgcccgcgcccgccacgcc
ctcgccctgttcgaactcggccggcctgaagccgtcgaacttggccgcgcagtgtggcgc
ggcgggccgatgagcgatctcagcgaagcggcactatcggcgcgcctcgccaatgtcctg
accccggcggaccatgacgcgcggatggatgcgctgctgtggaacagcaattcggcccag
gcgacccgccagttgctctacgtctcgcccgctgctcggctggtgttcctggcgcggttg
gggctggtcaatggccaggatccggcagcgcagggactggatcccggcccgggcgtgctc
cgcgatgccggctatgtctacaaccgcgtgcgaatgctgcggaccaccgggcaggctgcc
ctcgcctcgtcagtcatggcgacgcgaccgccgctggctgctccgccgcgcgatgcccgg
cgctggattggcgagctgctggcaaccgcgcgccgcagcgaagcggccaatgcggtgcgg
atcgccgcggcgattgatgaaacctttgcaccgggcactgatgtcagcgcgcagtccttc
gcgatccgtgacgactacacttcgctgatgtggctgggcgggaccaaggcgctgtatgag
ctgggcgatgccagccgcgctgcgcccctgttctatcgctatggcgccgccgcgcgcagc
ccgcagacccgttcgaagggttattactgggccggtcgcgccatggcccaggcgggcaac
ctggccgaagccaaccgctacttcgaaatggcggcgatctatcccgagcagttctatggc
cagctctcgctggagcggttgggacgtccgctaccggccttcaaccaggtgccccgcgcg
gtgccaaccgcggctgagcgcgctgcgttcaatgcccgccccctgacacaggctgtgcgc
gaagtggcgcgcgatagcgactggccgaccggcgtgcgctttttccgcgagatcagcgat
caggccctgaccgaagccgaccacgtgctggtggccgaccttgcgcgcgagctgggccgc
cgcgaccttgccgtgatcctggcccaggcggcgcataccgatggcttcggcgaatttcac
aagactggctatccgctgatcccggtggtcgcaggggcgaactggaccatggtccatgca
atcacccgccaggaaagccagttcgcgatgaacgcgatcagccacgctggtgcgcgcggg
ctgatgcagctcatgccaggaactgcgcgcgagcaggcgggcaagctgggccttgaatac
agccccgaggcgctgacgaccgacgccggctacaacatcatgctgggcgatgcctatttt
cggcggatgctggattacttcggcggcagttacccgctggcggtggcagcctataattcg
gggccgggcaacgtgaacaagttcctgcgcgccaacggcgatccacgcaatggcgggatc
gactggatcgactggatcgagcgcatcccgctgaccgagacgcgcggctatgtgcagcac
gtgctggaaaacgcggtggtctatgaagcgatgaacccggacaaggcgcggctgggcgga
cccaatgcgctcagccggttcatcggcaagcgcaacccaggttga
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