Neorhizobium galegae bv. orientalis HAMBI 540: RG540_CH24620
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Entry
RG540_CH24620 CDS
T03244
Name
(GenBank) Tetracycline-efflux transporter
KO
K08151
MFS transporter, DHA1 family, tetracycline resistance protein
Organism
ngg
Neorhizobium galegae bv. orientalis HAMBI 540
Brite
KEGG Orthology (KO) [BR:
ngg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ngg02000
]
RG540_CH24620
01504 Antimicrobial resistance genes [BR:
ngg01504
]
RG540_CH24620
Transporters [BR:
ngg02000
]
Major facilitator superfamily (MFS)
Drug transporters
Drug:H+ antiporter-1 (12 spanner) (DHA1) family [TC:
2.A.1.2
]
RG540_CH24620
Antimicrobial resistance genes [BR:
ngg01504
]
Gene variants
Tetracycline resistance genes
Transporters
RG540_CH24620
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
Sugar_tr
MFS_4
TRI12
Motif
Other DBs
NCBI-ProteinID:
CDN48628
UniProt:
A0A068SQY1
LinkDB
All DBs
Position
complement(2455861..2457120)
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AA seq
419 aa
AA seq
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MLDPKFVRRGLFLVFMILFLDIIGIAIIMPVLPTFLRELTGDDMSAAAVDGGWLLLIYSG
MQFLFAPLLGNLSDRFGRRPILLASVLTFALDNLICAAATSFWMLFVGRVLAGISGGSFA
TCSAYIADISNEKNRAKNFGLIGIAFGVGFTVGPVIGGLLGELGPRVPFLGAGLLSLANF
VASWFLLPETLDKANRRKFELKRANPLGALRQMRHYPGIGWVMLVMFLYWLAHAVYPSVW
SFVSAYRYGWSEGQIGLSLGLFGICAAFVMGVILPKLVPVLGEWKTAVLGLCFCCLGLTG
YAFAWQGWMVYAVILVTTIENVADPALRSIASAKVPPSAQGELQGAMTSLTSLTTIVGPA
IFTQLFSAFTGEHAKMEFAGAPYMMAAIFMACAILVFLSRISRKTQAAGRETELTHQIS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgctcgacccgaaatttgtccgccgaggccttttcctcgtcttcatgatcctgtttctg
gatatcatcgggatcgcaatcatcatgccggtgctgccgaccttcctgcgcgagctgacc
ggcgacgacatgagtgccgccgccgtcgacggcggctggctgctgctcatctattccggc
atgcagttcctgtttgcgccgctgctcggcaatctcagcgaccgtttcggccgccggccg
atcctgctcgcctcggtgctcaccttcgctctcgacaacctgatctgcgcggccgccacc
agtttctggatgctgttcgtcggtcgtgtgctggccggcatttcaggcggtagttttgcc
acctgctcggcctatatcgcagatatcagcaatgagaaaaaccgcgccaagaactttggc
ctgatcgggatcgccttcggcgtcggtttcacggtcggcccggtgatcggcggcctgctc
ggcgaactcggtccgcgcgtgccgttcctgggcgccgggctgctatcgctcgccaatttc
gtcgcctcctggttcctgctgccggagacgctcgacaaggcgaaccgccgcaagttcgag
ctgaaacgcgccaatccgctcggtgcgctgcgccagatgcgccactatccggggatcggc
tgggtgatgctggtgatgttcctgtattggctggcgcacgcggtctatccgtccgtctgg
tccttcgtgtccgcctatcgttacggctggagcgaggggcaaatcggcctgtcgctcggg
ctgttcggtatctgcgccgcatttgtcatgggcgttatcctgccgaaactcgtgcctgtg
ctcggcgaatggaagactgcggtgctcgggctttgtttctgctgcctcggccttaccggt
tatgccttcgcgtggcaggggtggatggtctatgccgtcatccttgtgacgacgatcgag
aacgtcgccgatccggcgctgcgtagcatcgcttcggccaaggtgccgccgtcggcccaa
ggggagctgcagggcgcaatgacgagcctcaccagcctgaccacgatcgtcggtccggcg
atcttcacgcagttgttcagtgcgttcacgggggagcatgcgaaaatggagttcgcaggc
gcgccgtacatgatggcggcgattttcatggcttgtgccattttggtgttcctgagccgg
atttcacgaaaaacacaggcggctgggcgcgaaaccgagctcacgcatcagatttcttga
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