Neorhizobium galegae bv. orientalis HAMBI 540: RG540_PA12040
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Entry
RG540_PA12040 CDS
T03244
Name
(GenBank) Dipeptide-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
ngg
Neorhizobium galegae bv. orientalis HAMBI 540
Pathway
ngg02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ngg00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RG540_PA12040
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ngg02000
]
RG540_PA12040
Transporters [BR:
ngg02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
RG540_PA12040
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
CDN51880
UniProt:
A0A068T396
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All DBs
Position
pHAMBI540a:complement(1255510..1257003)
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AA seq
497 aa
AA seq
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MSARIASIAAVLLALTASTALAQSKDTLTIDLPNDAATLDPHLQWNTDSYSIYRNIFDNL
LTRDVKGEIVPQIAKSWKYVDDKTLEFQIRDDVTFQDGTKLTAEDVAFSINRIIDPKLKS
PQLSQFDQIAKAEAVSPTVVKMTTKSPYPALLAQLVKLSIVPKAYVEKVGDQEFNLKPLG
SGPYKMANWQKGVQTELEAYGSYWRAKPPFQKVVFRTVPDVSTRIADLKTGKADLVRDVP
PDQAESIKSDSNSQVLSVPTERIGYLFINAQGGVTKDVRVRQAIAYAIDRQALVEALLEG
YGKPVEVLGAEPVFGYTDKIKGYEYNLDKAKELVKAAGAEGATVEFLTSPAYSRATVEAI
QQMVNEAGLKVEISSSDQATFLKRRQGDPANAGGLAFGAWSCACQDVDGVIFPLFRTGSI
WAKYSNEKFDAAVDKARVILDQKERLKLYEQAYQVLKDDVPGMGLYQAYALYGAAKKLKW
QPTANEAMFVMDMSWQQ
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccagaatagcctccatcgccgccgtgctgttggcgctcaccgcgtcgaccgcg
cttgcacaatccaaggatacgctgaccatcgacctgccgaacgatgcggcaacgctcgat
ccgcatctgcagtggaacaccgacagctactcgatctaccgcaatatcttcgacaacctt
ctgacccgcgacgtcaagggcgagatcgtgccgcagatcgccaagtcgtggaaatatgtc
gacgacaagacgcttgagttccagatccgcgatgacgttactttccaggacggcacgaag
ctgaccgccgaagacgtcgccttctcgatcaaccgcatcatcgacccgaagctgaagagc
ccgcagctctcgcagttcgaccagatcgccaaggccgaggcggtaagcccgaccgtggtc
aagatgaccaccaagtcgccttatccggcgctgctcgcccagctcgtcaagctctcgatc
gtgccgaaggcctatgtcgaaaaggtcggtgaccaggaattcaacttgaagccgctcggt
tccggcccctacaagatggccaactggcagaagggcgttcagactgaactcgaagcctat
ggcagctactggcgcgccaagccgccgttccagaaggtggttttccgcaccgttccggat
gtttcgacccggatcgccgaccttaagactggcaaggccgacctcgtccgcgacgtgccg
ccggatcaggctgaaagcatcaagagcgacagcaattcgcaggtcctctcggttccgacc
gagcgcatcggctacctattcatcaatgcccagggcggcgttaccaaggacgtccgcgtc
cgccaggcgatcgcctatgcgatcgaccgtcaggcgctcgtcgaggcgctgctcgaaggg
tacggcaagccggtggaagtgctcggcgccgagccggtcttcggttacaccgacaagatc
aagggctacgaatacaacctcgacaaggcgaaggaactggtgaaggccgccggcgcggag
ggcgcgaccgtcgaattcctgacctctcccgcctatagccgcgccaccgtcgaagccatt
cagcagatggtcaacgaagccggcctcaaggtggagatctcgtccagcgaccaggcgacc
ttcctgaagcgccgccagggcgatccggccaatgccggcggtcttgccttcggcgcctgg
tcctgcgcctgccaggacgtcgacggcgtgatcttcccgctgttccgcaccggcagcatc
tgggcaaagtactcgaacgagaagttcgatgccgccgtggataaggcacgcgtcatcctc
gatcagaaggagcgtctgaagctctacgaacaggcctaccaggtcctcaaggacgacgtt
ccgggcatgggcctctaccaggcttatgcgctctacggagccgccaagaagctgaaatgg
cagccgaccgccaacgaagccatgttcgtcatggacatgagctggcagcagtaa
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