KEGG   Nannospalax galili (Upper Galilee mountains blind mole rat): 103727450
Entry
103727450         CDS       T03372                                 

Gene name
Thbs1
Definition
(RefSeq) thrombospondin 1
  KO
K16857  thrombospondin 1
Organism
ngi  Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi04015  Rap1 signaling pathway
ngi04115  p53 signaling pathway
ngi04145  Phagosome
ngi04151  PI3K-Akt signaling pathway
ngi04350  TGF-beta signaling pathway
ngi04510  Focal adhesion
ngi04512  ECM-receptor interaction
ngi05144  Malaria
ngi05165  Human papillomavirus infection
ngi05205  Proteoglycans in cancer
ngi05206  MicroRNAs in cancer
ngi05219  Bladder cancer
Brite
KEGG Orthology (KO) [BR:ngi00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04015 Rap1 signaling pathway
    103727450 (Thbs1)
   04350 TGF-beta signaling pathway
    103727450 (Thbs1)
   04151 PI3K-Akt signaling pathway
    103727450 (Thbs1)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    103727450 (Thbs1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    103727450 (Thbs1)
  09143 Cell growth and death
   04115 p53 signaling pathway
    103727450 (Thbs1)
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    103727450 (Thbs1)
 09160 Human Diseases
  09161 Cancer: overview
   05206 MicroRNAs in cancer
    103727450 (Thbs1)
   05205 Proteoglycans in cancer
    103727450 (Thbs1)
  09162 Cancer: specific types
   05219 Bladder cancer
    103727450 (Thbs1)
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    103727450 (Thbs1)
  09174 Infectious disease: parasitic
   05144 Malaria
    103727450 (Thbs1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ngi04131]
    103727450 (Thbs1)
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:ngi00536]
    103727450 (Thbs1)
   04990 Domain-containing proteins not elsewhere classified [BR:ngi04990]
    103727450 (Thbs1)
Membrane trafficking [BR:ngi04131]
 Endocytosis
  Phagocytosis
   Opsonins
    103727450 (Thbs1)
Glycosaminoglycan binding proteins [BR:ngi00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   103727450 (Thbs1)
Domain-containing proteins not elsewhere classified [BR:ngi04990]
 Thrombospondin domain-containing proteins
  Thrombospondins
   103727450 (Thbs1)
SSDB
Motif
Pfam: TSP_C TSP_3 TSP_1 TSP1_spondin VWC cEGF EGF_3 TSP1_ADAMTS EGF_CA TSP1_CCN Laminin_G_2 Laminin_G_3 EGF Laminin_G_1
Other DBs
NCBI-GeneID: 103727450
NCBI-ProteinID: XP_008823512
LinkDB
Position
Un
AA seq 1171 aa
MGLAWGLSVLFLLRVCGSSRIPESGGDNSVFDIFELTGAARRGSGRRLVKGMDLSSPAFR
IENASLIPPVPDDKFQDLVDAVRAEKGFIFLASLRQMKKTRGTLLSVERKDHSGHVFSVV
SNGKAGTLDLSLSLPRKQQVVSVEEALLATGQWKSITLFVQEDRAQLYIDCEKMESAELD
VPIQDIFTRDLASVARLRIAKGDTNDNFQGVLQNVRFVFGTTPEDILRNKGCSNSAANVI
LTLDNNVVNGSSPAIRTNYIGHKTKDLQATCGISCDELSSMVLELRGLHAIVTTLQDSIR
KVTEENRELASELRRPPVCFHNGIQYRNNEEWTVDSCTECHCQNSVTICKKVSCPIMPCS
NATVPDGECCPRCWPSDSADDGWSPWSEWTSCSATCGNGIQQRGRSCDSLNNRCEGSSVQ
TRTCHIQECDKRFKQDGGWSHWSPWSSCSVTCGDGVITRIRLCNSPSPQMNGKPCEGKAR
ETKPCRKDACPINGAWGPWSPWDICSVTCGGGVQKRNRLCNNPAPQFGGKDCIGDETEKQ
VCNKQDCPIDGCLSNPCFAGAKCTSYPDGSWKCGACPPGYSGNGIQCKDIDECKLVPDAC
FNHNGEHRCENTDPGYNCLPCPPRFTGTQPFGRGVEHAMANKQVCKPRNPCTDETHDCNK
NAKCNYLGHYSDPMYRCECKPGYAGNGIICGEDTDLDGWPNENLVCVANATYHCKKDNCP
NLPNSGQEDYDKDGIGDACDDDDDNDKIPDDRDNCPFHYNPAQYDYDRDDVGDRCDNCPY
NHNPDQADTDSNGEGDACAVDIDGDGILNERDNCQYVYNVDQRDTDMDGVGDQCDNCPLE
HNPDQLDSDSDLIGDTCDNNQDIDEDGHQNNLDNCPYVPNANQADHDKDGKGDACDHDDD
NDGIPDDKDNCRLVPNPDQKDSDGDGRGDACKDDFDHDNVPDIDDICPENVDISETDFRR
FQMIPLDPKGTSQNDPNWVVRHQGKELVQTVNCDPGLAVGYDEFNAVDFSGTFFINTERD
DDYAGFVFGYQSSSRFYVVMWKQITQSYWDTKPTKAQGYSGLSVKVVNSTTGPGEHLRNA
LWHTGNTPGQVTTLWHDPRHIGWKDFTAYRWRLSHRPKTGFIRVVMYEGKKIMADSGPIY
DKTYAGGRLGLFVFSQEMVFFSDLKYECRDS
NT seq 3516 nt   +upstreamnt  +downstreamnt
atggggctagcctggggactaagtgtcctgttcctgttgcgtgtgtgtggcagcagccgc
attccagagtctgggggagacaacagcgtgttcgatatctttgaactcaccggagctgcc
cgcaggggctctggccgccgactagtgaagggcatggacctgtccagcccagctttccga
attgaaaatgccagtctgatcccccctgtgcctgatgacaagttccaagacctagtggat
gctgtgcgggcagaaaagggcttcatcttcctggcctctctgaggcagatgaagaagacc
cggggcactctgttatctgtggagcgaaaagatcattctggtcatgtcttcagtgtggtc
tccaacggcaaagccggcaccctggacctgagcctgagcttgcccagaaagcaacaagtg
gtgtcagtggaggaagctctcctagccactggccagtggaagagcatcactctattcgtg
caagaagacagggcccagctctacatcgactgtgagaagatggagagtgctgagctggac
gtccccatccaggatatcttcacaagggacctggccagtgttgccagactccgcattgca
aagggagacaccaatgacaattttcagggggtgctgcagaatgtgagatttgtctttgga
accacaccagaagacatccttaggaacaaaggctgctccaactcagctgccaatgtcatt
ctcacccttgacaacaatgtggtgaatggttccagccccgccatccgcaccaactacatt
ggccacaagaccaaggacctgcaggccacctgtggcatctcctgtgatgagctgtccagc
atggtcctagaactcaggggcctgcacgccatcgtgaccacactgcaggacagcatccgc
aaagtgacggaagagaacagagagttggccagtgaattgaggcggcctcccgtctgcttt
cacaacgggattcagtacaggaacaatgaggaatggactgtggatagctgcactgagtgt
cactgccagaactcagttaccatctgcaaaaaggtgtcctgtcccatcatgccctgttcc
aatgccacagttcctgatggagaatgctgtccacggtgttggcccagcgactctgcggac
gatggctggtctccctggtctgagtggacctcctgctctgcgacatgtggcaatgggatt
cagcagcgtggccgctcctgtgacagcctcaacaaccgatgcgagggctcctccgtccag
acccggacctgccacattcaggagtgtgacaagagatttaaacaggatggtggctggagt
cactggtccccgtggtcatcttgttctgtgacatgtggtgatggtgtgatcacaaggatt
cggctctgcaactctcccagcccccagatgaatggaaagccatgtgaaggcaaagctcgg
gagacaaaaccctgcaggaaagatgcctgcccgatcaatggagcctggggtccttggtca
ccatgggacatctgttccgtcacctgtggaggaggagtgcagaaacgaaaccggctctgt
aacaaccccgcaccccagtttggaggcaaagactgcattggtgatgagacagaaaaacaa
gtgtgcaacaagcaggactgtccaattgacggatgcctgtccaatccctgctttgcgggt
gccaagtgtactagctatcctgatggcagctggaaatgtggtgcctgtccccctggctac
agtggaaatggcatccaatgcaaagacattgatgagtgcaaactagttcctgatgcctgc
ttcaaccacaatggagagcaccggtgtgagaacacagaccctggctacaactgtctgccc
tgcccaccacgcttcactggcacccagccctttggccgaggcgtcgaacatgccatggcc
aacaaacaggtctgcaagccccgtaacccctgcacagatgagacacatgattgcaacaag
aacgccaagtgcaactacctgggccactacagcgaccccatgtaccgctgtgagtgcaag
cccggctatgcaggcaatggcatcatctgtggggaggacacagacctcgacggctggcct
aatgagaaccttgtgtgtgtggccaatgcaacttaccactgcaaaaaggacaattgcccc
aaccttcccaactcagggcaggaagactatgacaaggatggaatcggtgatgcctgtgat
gatgacgatgacaatgacaaaatcccagatgatagggacaactgcccattccattacaac
ccagcccagtatgactatgacagagatgatgtgggagaccgctgtgacaactgcccctac
aaccacaaccccgaccaggcagacacagacagcaacggggaaggagatgcctgtgccgtg
gacatcgatggagatggaatcctcaatgaacgagacaactgccagtatgtctacaatgta
gaccagagggacactgacatggatggggttggagatcaatgtgacaactgtcccctggaa
cacaatccagaccagctggactctgactcggacctcataggggatacctgtgacaacaat
caggacattgatgaggatggtcatcagaacaatctggacaactgtccctatgtgccaaat
gccaaccaagctgaccatgataaagatggcaaaggagacgcctgtgaccatgatgatgac
aatgatggcattcctgatgacaaggacaattgcaggctggtgcccaatcctgaccagaag
gactctgatggtgatggccgaggagacgcctgcaaagatgactttgaccatgacaatgtg
ccagacatcgatgacatctgtcctgagaatgttgacatcagtgagaccgatttccgccga
ttccagatgattcctctagatcccaaagggacatcccaaaatgatcctaactgggttgta
cgacatcagggcaaagaacttgtccagacagtcaactgtgatcctggacttgctgtaggg
tatgatgagttcaatgctgtggacttcagtggcaccttcttcatcaacactgagagagat
gatgactatgctggctttgtgtttggctaccagtccagcagccgattctacgtagttatg
tggaaacaaatcacccaatcctactgggacaccaagcccacaaaggctcagggatactca
ggcctgtctgtgaaggttgtgaactccaccacagggcctggtgagcacctgcggaatgct
ctgtggcacacaggaaatacccctggccaggtgaccaccctgtggcatgacccccgtcac
ataggctggaaagatttcactgcctacaggtggcgtctcagccataggccaaagactggt
ttcatcagagtggtgatgtatgaagggaagaaaatcatggctgactcaggacccatctat
gacaagacctatgctggtggtaggctaggcctgtttgtcttctctcaagaaatggtattc
ttctctgacctgaaatacgaatgtcgagattcctaa

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