KEGG   Nannospalax galili (Upper Galilee mountains blind mole rat): 103730089Help
Entry
103730089         CDS       T03372                                 

Gene name
Setdb1
Definition
(RefSeq) SET domain bifurcated 1
  KO
K11421  histone-lysine N-methyltransferase SETDB1 [EC:2.1.1.43]
Organism
ngi  Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi00310  Lysine degradation
ngi04550  Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:ngi00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    103730089 (Setdb1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04550 Signaling pathways regulating pluripotency of stem cells
    103730089 (Setdb1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ngi03036]
    103730089 (Setdb1)
Enzymes [BR:ngi01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.43  histone-lysine N-methyltransferase
     103730089 (Setdb1)
Chromosome and associated proteins [BR:ngi03036]
 Eukaryotic Type
  Histone modification proteins
   HMTs (histone methyltransferases)
    HKMTs (histone lysine methyltransferases)
     103730089 (Setdb1)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    103730089 (Setdb1)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: SET DUF5604 Tudor_4 TUDOR_5 Pre-SET MBD DUF4537 53-BP1_Tudor
Motif
Other DBs
NCBI-GeneID: 103730089
NCBI-ProteinID: XP_008826488
LinkDB All DBs
Position
Un
AA seq 1288 aa AA seqDB search
MSSLPGCINLDAATAAVESEEIAELQKAVVEELGISMEELRQLIDEELEKMDCIQQRKKQ
LAELETWVLQKESEVAHVDQLFDDASRAVTNCESLVKDFYSKLGLQYHDSSSDDEAFQPT
EIIEIPDEDDDVLSIDSGDAGSRTPKDQKLREAMAALRKSAQDVQKFMDAVNKKSSSQDL
HKGTLGQMSGELSKDGDLIVSMRILGKKRTKTWHKGTLIAIQTVGLGKKYKVKFDNKGKS
LLSGNHIAYDYHPPADKLFVGSRVVAKYKDGNQVWLYAGIVAETPNVKNKLRFLIFFDDG
YASYVTQSELYPICRPLKKTWEDIEDSSCRDFIEEYITAYPNRPMVLLKSGQLIKTEWEG
TWWKSRVEEVDGSLVRILFLDDKRCEWIYRGSTRLEPMFSMKTSSASALEKKQGGQLRTR
PNMGAVRSKGPVVQYTQDLTSTGTQFKPMVSSQPIAPPALPDPPLSPQAGDNESLESQLA
QSRKQVAKKSTSFRPGSVGSGHSSPASPTLSENVPGGKPGIGQTYRSPLASTPAAPAPAA
PPGVLAPPAFHGMLERAPAEPSYRAPMEKLFYLPHVCSYTCLSRVRPMRSEQYRGKNPLL
VPLLYDFRRMTARRRVNRKMGFHVIYKTPCGLCLRTMQEIERYLFETGCDFLFLEMFCLD
PYVLVDRKFQPFKPFYYILDITYGKEDVPLSCVNEIDTTPPPQVAYSKERIPGKGVFINT
GPEFLVGCDCKDGCRDKSKCACHQLTIQATACTPGGQVNPNSGYQYKRLEECLPTGVYEC
NKRCKCDPNMCTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDIAKGSFVCIYAGKILTDDF
ADKEGLEMGDEYFANLDHIESVENFKEGYESDVATSSDSSGVDLKDQEDGNSGSEDPEES
NDDSSDDNFCKDEDFSTSSVWRSYATRRQTRGQKESGLSEVASKDSRPPDLGPPHIPPSI
PVGGCNPPSSEETPKNKVASWLSCNSVSEGGFADSDSRSSFKTSEGGDGRAGGGRGETEK
ASTSGLSIKDEGDIKQSKKEDPDDRNKISVVTESARNYGYNPSPMKPEGLRRPPSKTSMH
QSRRLVSSAQSNPDDVLTLSSSTESEGESGTSRKPTAGQTSATAVDSDDIQTISSGSEGD
DFEDKKNLSGPMKRQVAVKSTRGFALKSTHGIAIKSTNMASVDKGESAPIRKNTRQFYDG
EESCYIIDAKLEGNLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFASKRIRAGTELTW
DYNYEVGSVEGKELLCCCGAIECRGRLL
NT seq 3867 nt NT seq  +upstreamnt  +downstreamnt
atgtcctccctccctgggtgcattaatttggatgcagcaacagctgcagtggaatctgaa
gagattgcagagctgcaaaaggcagtggttgaagagctgggtatctctatggaagaactt
cggcagctcattgatgaagaactggagaagatggattgtatacagcaacgcaagaagcag
ctagcagagttggagacatgggtgctacagaaagagtctgaagtggctcatgttgaccag
ctgtttgatgatgcatccagggcagtgactaattgtgagtctttggtgaaggacttctac
tctaagctgggactacagtatcatgacagtagttctgatgatgaagctttccagcctaca
gaaataattgagattcctgatgaagatgatgatgtcctcagtattgattcaggtgatgct
gggagcagaactccaaaagaccagaagctccgtgaagctatggctgcgttaagaaaatca
gctcaggatgtccagaagttcatggatgctgtcaacaagaagagcagttcccaggatctg
cataaaggaaccttgggtcagatgtctggagaactgagcaaagatggtgacctgatagtc
agcatgcggattctgggcaagaagagaactaagacatggcacaagggcacccttattgcc
atccagacagttggactaggaaagaaatacaaggtgaaattcgacaacaaaggaaagagt
ctgctgtcggggaaccatattgcctatgattaccaccctcctgctgacaagctgtttgtg
ggcagtcgagtggtggccaaatacaaagatggaaatcaggtctggctttatgctggcatt
gtagctgaaacaccaaacgtcaaaaacaagctcaggtttctgattttttttgatgatggc
tacgcttcctatgtcacacagtcagaactatatcccatttgccgaccactgaaaaagact
tgggaggacatagaagacagctcctgccgagatttcatagaggaatatatcactgcctac
ccaaaccgccccatggtactgctcaagagcggccaacttatcaagaccgagtgggaaggc
acgtggtggaagtcccgagttgaggaggtggatggcagcctagtcaggatcctcttcctg
gatgacaaaagatgtgaatggatctatcgaggctctacacgtttggaacccatgttcagt
atgaaaacatcctcagcctctgcactggagaagaagcaaggggggcaactcagaacccgt
ccaaatatgggtgctgtgaggagcaaaggtcctgttgtccaatacacacaggatctaacc
agcactggaacccagttcaaacccatggtatcctcacagcccattgctccaccagcccta
cctgatccacctctgtccccccaggcaggtgacaatgaaagcttggaaagccagcttgct
cagtcacggaagcaggtagccaagaagagtacatcattccggccaggatctgttggctct
ggtcattcctcccctgcatcacccacactcagtgaaaatgttcctggtgggaaacctgga
attggccagacatacagatcacctttggcctcgacaccagctgccccagcacctgcagcc
cctccaggggttctggcccccccagccttccatggcatgctagagcgggccccagctgag
ccctcctaccgcgcccccatggagaagctcttctacttgcctcatgtctgcagctataca
tgtctgtctcgggtcagacctatgaggagtgaacagtaccgaggcaagaaccctctgttg
gtcccattgctgtatgacttccggaggatgacagcccggcgccgagttaaccgcaagatg
ggctttcatgttatctataagacaccttgtggcctctgccttcggacaatgcaagaaatt
gaacgctacctttttgagactggctgtgacttccttttcttggagatgttctgtttggat
ccatatgtgcttgtagacaggaagtttcagccctttaaacctttttactatattttggac
atcacctatggcaaggaagatgttcctctgtcatgtgttaatgagattgacacaactccc
ccaccccaggtggcttacagcaaagagcgcatccctggcaagggtgttttcattaataca
ggccctgaatttctggttggctgtgactgcaaggacgggtgtcgggacaagtccaagtgt
gcctgccatcagctaaccatccaggctacagcctgcaccccagggggccaagtcaaccct
aactctggctaccagtacaagagactagaagagtgtctacccacaggggtttatgagtgt
aacaaacgctgcaaatgtgacccaaacatgtgcacaaatcggttggtacagcatggacta
caggttcgactgcagctgtttaagacgcagaacaagggctggggtattcgctgcttggat
gacatcgccaaaggctcttttgtctgtatttatgcaggaaaaatcctgacagatgacttt
gcagacaaggaaggcctggagatgggggatgagtactttgcaaatctagaccacattgag
agtgtggaaaacttcaaggaaggatatgagagtgatgtcgccacttcctctgacagcagt
ggagtagacctgaaggaccaggaagatggcaacagtggttcagaggaccctgaagaatct
aatgatgacagctcagatgacaacttctgtaaggatgaggactttagcactagctcagtg
tggcgcagctatgccacccggcgccagacccggggtcagaaggagagtggactgtccgag
gtggcttccaaggactcgcgccccccagaccttgggcccccacatatccctccctccatc
cctgtaggaggctgcaatccaccttcctctgaagagacacccaagaacaaggtggcctca
tggctgagctgcaatagtgtcagtgaaggtggttttgctgactctgacagccgatcttca
ttcaagactagtgaaggtggagatggccgggcagggggaggtcgaggggagactgagaaa
gcctccacctcaggattgagcatcaaggatgaaggtgacataaagcagtccaagaaagag
gaccctgatgaccgaaacaagatatcagtagttactgaaagcgctcgtaattatggatac
aatccttctcccatgaagcctgaagggcttcgccgcccacctagtaaaacttctatgcac
cagagccggagactggtgtcttctgcccagtcaaaccctgatgatgtcctgacactgtcc
agcagcacagaaagtgagggggaaagtggaaccagccgaaagcctactgctggtcagact
tcagccacagcagttgacagtgatgatatccagaccatctcttctggctctgaaggcgat
gactttgaggacaagaagaacttgtctggtccaatgaagcgccaggtggcagtaaaatca
acccgaggctttgctcttaaatcaacccatgggattgccattaaatcaaccaacatggct
tccgtggacaagggagagagtgcaccaattcgcaagaacacacgccaattctatgatggt
gaagagtcatgctacatcattgatgccaagcttgaaggcaacttaggccgctacctcaat
catagttgcagccccaacctgtttgtccagaatgtctttgtggatacccatgatcttcgc
ttcccctgggtggccttcttcgccagcaagaggatccgggctggaacagaacttacttgg
gactacaactacgaagtgggcagtgtggaaggcaaagagctgctgtgctgttgtggggcc
atcgagtgcagagggcgtcttctttag

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