Nannospalax galili (Upper Galilee mountains blind mole rat): 103733755
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Entry
103733755 CDS
T03372
Symbol
Ddx50
Name
(RefSeq) DExD-box helicase 50
KO
K13183
ATP-dependent RNA helicase DDX50 [EC:
5.6.2.7
]
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ngi03041
]
103733755 (Ddx50)
Enzymes [BR:
ngi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
103733755 (Ddx50)
Spliceosome [BR:
ngi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
103733755 (Ddx50)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
ResIII
CMS1
ERCC3_RAD25_C
AAA_30
Motif
Other DBs
NCBI-GeneID:
103733755
NCBI-ProteinID:
XP_008830863
UniProt:
A0A8C6W301
LinkDB
All DBs
Position
Un
AA seq
735 aa
AA seq
DB search
MPGKLLWGDIMELEAPLEESESQRKDRQKNDRRKSRHRESDERTETRENGVTDDLDAPKP
KKAKMKEKLNGDTEEGLNRLSDEFSTSHKSRRKDLPNGDVDEYEKKSKRVSSLENSTHKS
SDKLEETLTREQKEGAFSNFSISEETIKLLKGRGVTYLFPIQVKTFGPVYEGKDLIAQAR
TGTGKTFSFAIPLIERLQRNQETIKKSRSPKVLVLAPTRELANQVAKDFKDITRKLSVAC
FYGGTSYQSQINHIRNGIDILVGTPGRIKDHLQSGRLDLSKLRHVVLDEVDQMLDLGFAE
QVEDIIHESYKSDSEDNPQTLLFSATCPQWVYKVAKKYMKSRYEQVDLVGKMTQKAATTV
EHLAIQCHWSQRPAVIGDVLQVYSGSEGRAIIFCETKKNVTEMAMNPHIKQNAQCLHGDI
AQSQREITLKGFREGSFKVLVATNVAARGLDIPEVDLVIQSSPPQDVESYIHRSGRTGRA
GRTGICVCFYQPRERGQLRYVEQKAGITFKRVGVPSTMDLVKSKSMDAIRSLASVSYAAV
DFFRPSAQRLIEEKGAVDALAAALAHISGASSFEPRSLITSDKGFVTMTLESPEEIQDVS
CAWKELNRKLSSNAVSQITRMCLLKGDMGVCFDVPTTESERLQAEWHDSDWILSVPAKLP
EIEEYYDGNTSSNPRQRSGWSSGRSGRSGRSGGRSGGRSGRQSRQGSRSGSRQDARRRSG
NRNRSRSGGHKRSFD
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgccggggaaacttctctggggggacataatggagctcgaggcacccctggaagagtcc
gagagccagaggaaggacaggcaaaagaatgatagaaggaagtcaaggcatcgtgaatca
gatgagagaacagaaacaagagaaaatggtgttacagatgacttggatgctcccaagccc
aaaaaagctaaaatgaaagaaaagctaaatggagacacggaagaaggacttaatagactt
tcagatgagttttccacatctcataaatcaagaagaaaagacctaccaaacggagatgtt
gatgaatatgaaaaaaaatcaaaaagagtgtcttccttagaaaattctacccacaaatca
agtgataaactagaggagactctgacacgtgaacaaaaggaaggtgccttctccaatttc
tccatttctgaggagactataaagcttctgaaaggtcgaggggtaacatatctctttcct
attcaagttaaaacctttggtcctgtatatgaaggaaaagatttaattgctcaagcccgg
acaggaacaggaaagacattctcttttgccatacccttgattgaaaggctccaaagaaat
caagaaacaattaaaaaaagccgctcaccaaaggttcttgttttggctccaacaagggaa
ttggcaaaccaagtagccaaagatttcaaagatataactagaaaactcagtgtggcctgt
ttttatggtggaacatcatatcaaagccaaattaatcatattcgaaatggtattgacatc
ttggttgggactcctggtcgtatcaaagaccatctacagagcggccgtctggatctttct
aaactacgccatgttgtgcttgatgaagtggatcaaatgttagatttaggttttgctgaa
caagttgaagatataattcacgaatcctacaaatctgattctgaagacaatcctcagact
ttacttttttctgcaacttgcccacagtgggtatacaaagttgcaaaaaaatacatgaaa
tccagatatgaacaggttgaccttgttggaaaaatgactcaaaaagctgcaactactgtg
gaacatttggctatccagtgccactggtctcagagaccagcagttattggagatgttctt
caagtctacagtggatcagaagggagagctattatcttctgtgaaaccaagaagaatgtt
actgaaatggccatgaatcctcatataaagcagaatgcccagtgtttacatggggacatt
gcacagtcccaaagagaaattaccctgaaaggcttcagagaaggtagttttaaagttttg
gtcgcaaccaatgtggctgcccgtggcttggacattcctgaggttgacctggtgattcaa
agttctcctccccaggatgttgagtcctatattcatcgctctggacgcacaggtagagct
ggccggacagggatttgtgtatgtttttatcaaccaagagaaagaggtcaactgagatat
gtggaacagaaagcgggaattacttttaaacgtgtaggtgttccttctacaatggattta
gttaaatctaaaagcatggatgccatcaggtctctggcttctgtttcttatgctgctgtt
gattttttccgaccatcagctcaaagactaatagaagaaaagggggcagtggatgcattg
gctgcagcattagcccacatttctggtgcatcaagctttgaacctcgatctttgatcacg
tctgataagggatttgtgaccatgactttggaaagcccagaagaaatacaggatgtcagc
tgtgcttggaaagaacttaatagaaagctgagtagtaatgccgtgtctcaaataaccaga
atgtgtctcttaaaaggagatatgggtgtttgctttgatgttcccacaactgagtcagaa
aggttacaggcagagtggcatgattcagactggatactctcagtgccagccaaattacct
gaaattgaagaatattatgatggaaacacatcttctaatcccagacagaggagtggctgg
tcaagtggcagatcaggccgttcaggccggtctggtggtagatctggtggccgatcaggt
agacaaagtcgacagggaagtcggtcaggaagtcggcaagatgctagaagacggagtggg
aacagaaatcgatcaagaagtgggggccacaaacggagttttgactga
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