Nannospalax galili (Upper Galilee mountains blind mole rat): 103738237
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Entry
103738237 CDS
T03372
Symbol
Atg16l1
Name
(RefSeq) autophagy related 16 like 1
KO
K17890
autophagy-related protein 16-1
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi04136
Autophagy - other
ngi04140
Autophagy - animal
ngi04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
103738237 (Atg16l1)
04136 Autophagy - other
103738237 (Atg16l1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
103738237 (Atg16l1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ngi04131
]
103738237 (Atg16l1)
03029 Mitochondrial biogenesis [BR:
ngi03029
]
103738237 (Atg16l1)
Membrane trafficking [BR:
ngi04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
103738237 (Atg16l1)
Others
Rab GTPases of specific organelles
Auto phagosome
103738237 (Atg16l1)
Mitochondrial biogenesis [BR:
ngi03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
103738237 (Atg16l1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG16
WD40
ANAPC4_WD40
eIF2A
NBCH_WD40
CCDC93_CC
KASH_CCD
APEH_N
TolB_like
Motif
Other DBs
NCBI-GeneID:
103738237
NCBI-ProteinID:
XP_008836330
UniProt:
A0A8C6R283
LinkDB
All DBs
Position
Un
AA seq
623 aa
AA seq
DB search
MSSGLRAADFPRWKRHIAEELRRRDRLQRQAFEEIILQYNKLLEKSDLHSVLAQKLQAEK
HDIPNRHEISPGHDGAWNDSQLQEMAQLRIRHQEELTELHKKRGELAQLVIDLNNQMQQK
DREMQMNEAKIAECLQTISDLESECLDLRTKLQDLEIANQTLKDEYDALQITFTALEEKL
RKTTEENQELVTRWMAEKAQEANRLNAENEKDSRRRQARLQKELAEAAKEPLPVEQDDDI
EVIVDETSDHTEETSPVRAMSRAATKRLSQPAGGLLDSITNIFGLSESPLLGHRSSDAAR
RRSVSSFPVSHDSVDTHPTSGKDVRVPTSALYVFDAHDGEVNAVQFSPGSRLLATGGMDR
RVKLWEVFGDKCEFKGSLSGSNAGITSIEFDSAGAYLLAASNDFASRIWTVDDYRLRHTL
TGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVMS
GHFDKKIRFWDIRSESVVREMELLGKITALDLNPERTELLTCSRDDLLKVIDLRTNAVKQ
TFSAPGFKCGSDWTRVVFSPDGSYVAAGSAEGSLYVWNVLTGKVEKVLLKQHSSSINAVA
WSPSGLHVVSVDKGSKAVLWAQP
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgggcctccgcgccgcggacttcccccggtggaagcgccacatcgcagaggag
ctgaggcgccgggaccggctgcagaggcaggcgttcgaggagatcatcctgcagtataac
aagttgctggaaaagtcagatcttcattcagtattggcccagaaactacaagctgaaaag
catgacataccaaaccgacacgaaatcagtcctggacacgatggtgcttggaatgacagt
cagctacaagaaatggcccagctgaggatcagacaccaggaagagctgactgaattacac
aagaaacgtggagagttagctcagttggtgattgacctgaataaccaaatgcagcagaag
gacagggagatgcagatgaatgaagcaaaaattgcagagtgtttacagaccatctctgac
ctggagtcagagtgcctggatctgcgtaccaaactgcaggaccttgaaatagccaaccag
accctgaaggatgaatatgatgccctgcagatcacgttcactgctctagaggagaaactg
aggaaaactaccgaggaaaaccaggagttggtcaccaggtggatggcggagaaggcccag
gaagccaatcggctcaatgcagagaacgagaaggactccaggaggcgtcaagcacggctg
cagaaagagcttgcagaggcagcgaaggagcctctgcctgttgaacaggatgatgacatt
gaagttatcgtggatgagacctcagatcacacagaggagacctcccctgtgcgagccatg
agcagagcagctactaagcgactctcgcagcctgctggaggccttctggattctatcact
aatatctttggtctgtccgaatctccccttttgggacaccgttcttctgatgctgccagg
agacgctctgtctcttccttcccagtctcccacgacagtgtggacactcatcctacttct
ggtaaagatgtgagagtcccaacttctgccttgtatgtctttgacgcgcatgatggagaa
gtcaatgccgtgcagttcagtccaggctccaggttactggccactggaggcatggaccgg
agggttaagctttgggaagtatttggagataaatgtgaattcaagggctccctgtctgga
agtaatgctgggattacaagcattgaatttgatagtgccggagcttacctcttagcagct
tcaaatgattttgcaagcagaatctggactgtggatgattaccgattacggcacacactc
acaggccacagtgggaaagtgctctctgccaaattcttgttggacaatgcacggatagtc
tcaggaagtcacgaccggaccctcaaactctgggatctgcgcagcaaagtctgcataaag
acagtgtttgcaggatccagctgcaacgatattgtctgcactgagcagtgtgtaatgagt
ggacattttgacaagaagattcgtttctgggatatccgatcagagagtgtggtccgagag
atggagctgttggggaagatcactgctcttgacttaaacccggagaggactgagctcctg
acctgctctcgtgatgaccttctgaaagtcattgatctccgaacaaacgccgtcaagcag
acattcagtgcacctggattcaaatgtggctccgactggacccgagttgtcttcagcccc
gatggcagttatgtggcggcaggctcagctgagggctctctttatgtctggaacgtgctc
acagggaaggtcgagaaggttcttttgaaacagcacagctcttcaatcaatgctgtggca
tggtccccctccggtttgcatgtcgtcagtgtggacaaaggaagcaaagctgtgctgtgg
gcacaaccttga
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