Nannospalax galili (Upper Galilee mountains blind mole rat): 103743504
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Entry
103743504 CDS
T03372
Symbol
Smc1b
Name
(RefSeq) structural maintenance of chromosomes 1B
KO
K06636
structural maintenance of chromosome 1
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi04110
Cell cycle
ngi04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
103743504 (Smc1b)
04114 Oocyte meiosis
103743504 (Smc1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ngi03036
]
103743504 (Smc1b)
Chromosome and associated proteins [BR:
ngi03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
103743504 (Smc1b)
Meiosis-specific proteins
Cohesin complex and associated proteins
103743504 (Smc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
AAA_29
AAA_23
Motif
Other DBs
NCBI-GeneID:
103743504
NCBI-ProteinID:
XP_017656515
LinkDB
All DBs
Position
Un
AA seq
1238 aa
AA seq
DB search
MGWLEVLLVENFKSWRGRQVIGPFKRFTCIVGPNGSGKSNVMDALSFVVGEKTANLRVKN
IQELIHGAHIGKPVSSSASVKIIYIEESGEEKTFARIIRGRCSEFHFDDKPVSHSAYIAQ
LEKIGIIVKAWSCLVFQGTVESISLKKSKERTQFFEEISTSGELMGEYEEKKKKLQKAEE
DVQFHFSKKKNVAAERKHAKIEKEEAERYQSLLEELKINKRQLMLFQLYYNEEKINFLNT
ELQHMDRNLNVIKETLSHHENILKAKKKDHGMLSRQLQQTGKELKSLETLLNQKRPQYIK
AKENTSHHLKKLDLSKKSIKDNEKQCSKQEEDIRALETELGDLNSAWRSFEKQIEEEVLL
KGRHIELEASQLDHYKELKEQVRRKVAIMTQQLEKLRWEQKAEKERLTFEERRHGEVQAV
LSLMVPKFGCYCSCCRDCLEKKKKQEHTLVDEIEHTKSRMSEVNEELSLIRSELQNAGIE
DHEGKRQRKRAEVLENLKRLYPDSVFGRLLDLCHPIHKKYQLAVTNLFGQYMVAIIVASK
KVARDCIRFLKEERAEPETFLALDYLDIKPINERLREIKGCKMMIDVIKTQFPQLKKVIQ
FVCGNGLVCETVEEARQIAFGGPERRKAVALDGTLFLKSGVISGGSSDLKHKARCWDEKE
LNTLRDKRGQLVQELKELMKTLRKETDLKQIQALVQGTSTRLKYSQNELEMIKKKHLDAF
YWEQSQLQSELLNIESQCTMLSEGINEQQQRIEAFQEKIDKVEDDIFQHFCEEIGVANIH
EFENKHVKLQQENDQKRLEFEKQKTRLNIQLEYSRNQLKKKLSKIVTLNETIQKGKDDID
NLKKTEESCLQIVDELLGKQEQLKEALATQNSNIEKIHTQIEEERKKFLAVDREMGKLQK
EMVVIQGSLEQKRLEKHNLLLDCKVQDIEILLLLGSLEDITEVELGTETESTQATMDIYE
KEASIEVDYSPLREDLKGLPSDKEVDAHLTLLLQQVASQENVLLKTAAPNLRALENLKAV
REKFQESTDAFEASRKEARICRQEFEQVKKRRYDLFSRCFEHISISIDQIYKKLCRNNSA
QAFLSPENPEEPYLDGISYNCVAPGKRFMPMDNLSGGEKCVAALALLFAVHSFRPAPFFV
LDEVDAALDNTNIGKVSSYIKEQTKQEFQMIVISLKEEFYSRAEALIGIYPEYDECMFSH
VLTLDLSKYPDTEEQEGSRRPRKSRTSQQSQSPQSPRS
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
atggggtggctggaggtgctgctcgtggagaacttcaagtcgtggcgcggccgccaggtc
atcgggcccttcaagaggttcacctgcatcgtgggccccaatggctccggaaaatctaat
gtaatggatgcacttagttttgtagtaggagaaaagacagctaatttaagagtaaaaaat
atccaagaacttattcatggagcacatattggaaaacctgtgtcatcttctgcaagcgta
aaaattatatatatagaagaaagtggagaagagaaaacatttgcaaggattatccgaggg
cgatgctcagaatttcattttgatgataaacctgttagtcattctgcgtacatagcacag
ttggaaaagataggcataatagtcaaagcctggagctgccttgtttttcagggaactgtg
gagtccatttccttgaaaaagtccaaagaaagaacccagttttttgaggaaatcagcacc
tcaggagagctgatgggagaatatgaggaaaagaagaaaaagctgcaaaaagctgaggaa
gacgtacaatttcatttcagtaagaaaaaaaatgtcgccgcagagcgcaagcatgcaaaa
atagagaaggaagaggcagaacgttaccaaagtctccttgaagaattgaaaataaacaag
agacaactgatgcttttccaactatattataatgaggaaaaaattaattttctgaacact
gaattacaacatatggacaggaatttgaatgtcataaaagagactctttctcaccatgaa
aatatactcaaagccaagaaaaaggatcatggaatgttaagtagacaactacagcaaaca
ggaaaagaattgaaatctcttgaaacacttttaaatcaaaagaggcctcagtacattaaa
gcgaaagaaaacacatctcaccatctcaagaaattggatttgtctaagaaatcaataaaa
gacaatgaaaaacagtgttctaaacaggaggaagatataagagccctggagacagagctg
ggtgacctaaatagtgcatggagaagttttgaaaagcagatagaggaagaagtcttactt
aaagggcgacacattgaattggaagctagtcagctggatcattataaagagctgaaggag
caagtaagaaggaaagtagctataatgactcaacagttggaaaaactacggtgggaacag
aaggcagaaaaagaaagattgacatttgaggagaggagacatggagaagttcaggctgtg
ctttccctgatggttcccaaatttggttgttactgttcctgctgtagggattgcctagaa
aagaagaagaagcaggagcataccctggtagatgagattgagcacacaaaatcaagaatg
tctgaagttaatgaagaacttagtctcatcagaagtgaattgcagaatgctggaattgaa
gaccatgagggaaaacgtcaacggaagagagcagaagttctggaaaaccttaaaagactt
tatccagattctgtgtttggaagactgcttgacctgtgtcaccctatccacaagaaatac
cagctggctgtgactaacctgtttggccagtacatggttgccattattgtagcctctaaa
aaggtggcaagagattgtattcgatttctgaaggaggaaagagctgaacctgagacattc
ctcgctctagattaccttgatatcaagcctatcaatgaaagactaagggaaattaagggc
tgtaaaatgatgattgatgttataaagactcagtttcctcagttgaagaaagtgattcag
tttgtctgtggaaatggccttgtctgtgagactgtggaagaagcaagacagattgcattt
gggggacctgaaagacggaaggcagtagcacttgatggaacactgtttttaaaatccgga
gtgatctctggagggtcaagtgacttgaaacacaaggctcgatgctgggatgagaaagaa
ttaaacactctgagagacaagagaggccagctagttcaagaactgaaggagttaatgaag
acactccgaaaggaaacagatttgaaacaaatacaggctctagtacaaggaactagtacc
cgactcaagtattcccaaaatgaactagagatgattaaaaagaagcaccttgatgctttt
tactgggaacagtctcagctacaaagtgaattactaaatattgagtctcagtgtactatg
ctgagtgaaggaatcaatgagcaacagcaaagaattgaagcatttcaagaaaagatagat
aaggtagaagatgacatattccaacacttctgtgaagaaattggtgtggcaaatatacat
gaatttgagaacaaacatgttaaactgcagcaagaaaatgatcaaaaaagattagaattt
gaaaaacaaaaaactcggcttaatattcagcttgaatatagtcggaatcagctgaagaaa
aaactgagtaagatcgtcacattgaatgaaactatccagaaaggcaaagatgacatcgat
aacctaaagaagactgaagaaagctgtctgcaaattgtggatgaactcctggggaagcag
gaacaacttaaggaagctcttgccactcagaattccaacattgagaaaattcacactcaa
attgaagaggaacggaagaagtttctggctgttgatagggaaatgggaaaattacagaag
gaaatggtagtcatccagggctctctggaacagaagcgactggagaagcataacctgctg
cttgactgcaaagtccaagacatcgaaatccttcttctgttggggtcactggaagacata
accgaagtggagttgggaactgaaacagaaagtacccaggcaacaatggatatctacgaa
aaagaagcttccattgaagtagactacagccctctcagggaggatttgaagggtctacca
tcagataaggaggtggatgcccaccttacactccttctgcagcaagtagcatcccaggaa
aatgttcttctgaagacagcagccccaaacctacgagcactggagaacttaaaggctgtt
agagaaaagtttcaggagtccacagacgcttttgaggccagcagaaaggaagccagaata
tgtaggcaagagtttgaacaagtgaaaaaacggaggtacgatcttttcagccggtgtttt
gagcacatctcaatctcaattgatcaaatctacaagaagctctgcagaaacaacagtgcc
caagcatttcttagcccagagaaccctgaagaaccctacttagatgggattagctataat
tgtgtagctccaggaaaacggtttatgccaatggacaatctgtcagggggagaaaaatgt
gtggcagctttggctctgctgtttgctgtacacagttttcggcctgctccattctttgtt
ttagatgaagtggatgcagcactggacaatactaacattggcaaggtatcaagttacatc
aaagagcagactaagcaagagtttcagatgatagtcatttccttgaaagaagagttctac
tccagagctgaggcactgataggcatctacccggagtacgacgagtgcatgttcagccat
gttctgaccctagatctttcaaagtatccagacactgaagagcaagaaggtagcaggaga
ccccggaagtccaggacatcacaacagtcccagtccccgcagtccccccgcagttag
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