Nannospalax galili (Upper Galilee mountains blind mole rat): 103745031
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Entry
103745031 CDS
T03372
Symbol
Ddx46
Name
(RefSeq) DEAD-box helicase 46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
3.6.4.13
]
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103745031 (Ddx46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ngi03041
]
103745031 (Ddx46)
Spliceosome [BR:
ngi03041
]
Complex A
U2 snRNP components
U2 related factors
103745031 (Ddx46)
Complex B
103745031 (Ddx46)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
103745031
NCBI-ProteinID:
XP_017657377
LinkDB
All DBs
Position
Un
AA seq
1031 aa
AA seq
DB search
MGRESRHYRKRSASRGRSGSRSRSRSPSDKRSKRGDDRRSRSRDRDRRRERSRSRDKRRS
RSRDRKRLRRSRSRERDRSRERRRSRSRDRRRSRSRSRGRRSRSSSPGGKSKKAENRSRS
KEKTEGGESSKEKKKDKDDKEDEKEKDAGNFDQNKLEEEMRKRKERVEKWREEQRKKAME
NIGELKKEIEEMKQGKKWSLEDDDDDEDDPAEAEKEGNEMEGEELDPLDAYMEEVKEEVK
KFNMRSVKGGAGNEKKSGPTVTKVVTVVTTKKAVIDSDKKKGELMENDQDAMEYSSEEEE
VDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGI
TVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGS
GKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVY
GGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFE
PQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVI
EEEKKFLKLLELLGHYQESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDS
IINDFKNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAY
TFITEDQARYAGDIIKALELSGTAVPPDLEKLWSDFKDQQKAEGKIIKKSSGFSGKGFKF
DETEQALANERKKLQKAALGLQDSDDEDAAVDIDEQIESMFNSKKRVKDMAAPGTSSVPA
PTAGNAEKLEIAKRLALRINAQKNLGIESQDVMQQATNAILRGGTILAPTVSAKTIAEQL
AEKINAKLNYVPLEKQEEERQDGGQNESFKRYEEELEINDFPQTARWKVTSKEALQRISE
YSEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQKAKAEITRLIKEELIRLQNSY
QPTNKGRYKVL
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgggccgagagtcgcgtcactatcgcaagaggtcagcatcacgaggacgctctggaagt
cgatcgagaagtcggtcaccctctgacaaaagaagcaaacgtggagatgacagacggtct
agaagtagagatagagatagaaggagagagaggtctcggagtagggacaaaagaagatct
cggtcaagggacaggaagcgtctaaggcgttccagaagcagagagagagacagaagccga
gagcgaagacgatctcggagccgagataggaggcgctcaaggagtagaagccggggccgg
cgttcccgctcctccagtcctggcggtaaaagcaagaaggctgagaataggtctaggtcc
aaagagaaaacagaaggcggggaaagttctaaagagaagaaaaaagacaaagatgataag
gaagatgaaaaagaaaaagatgctggtaactttgaccagaataagctggaggaagaaatg
agaaagcgaaaagaaagagttgaaaaatggcgagaagaacagcgtaaaaaggccatggaa
aacataggagaactgaaaaaggaaatcgaagagatgaaacaagggaaaaagtggagttta
gaggatgatgatgatgatgaagatgatcctgcagaagctgaaaaggaaggaaatgaaatg
gagggtgaggaattagatccattagatgcttacatggaagaagtgaaagaagaagtaaaa
aagtttaacatgagaagtgtaaaaggaggcgcaggaaatgaaaagaagtctgggcccaca
gtcacaaaagtcgttactgttgtaacaactaaaaaggctgttatagactctgataagaag
aaaggtgagctgatggagaatgaccaggatgccatggagtattcttcagaggaggaggaa
gttgatcttcagactgctcttacaggataccagacaaaacagagaaagcttctagaacca
gttgatcatggaaaaattgagtatgaaccattcagaaaaaatttttatgttgaagttcca
gaactagcaaaaatgtctcaagaagaagtgaatgtatttcgattggaaatggagggcatt
acggttaaaggaaaaggttgtcccaaaccaattaaatcatgggtccagtgtgggatttcc
atgaagatcttaaattccctcaaaaagcatggctatgaaaagcccacacccatccaaacc
caagccattcctgctataatgtctggaagagatttgattggtattgccaagacaggaagt
ggaaaaaccattgcttttctcttgcccatgtttagacacatcatggatcagaggtcatta
gaagaaggagaggggccaatagctgtcatcatgactccaactcgagaactggctttacaa
attactaaagaatgtaagaagttttcgaagaccttgggacttagagtggtctgtgtttat
ggaggaacaggaatcagtgagcagattgctgaactgaaaagaggtgctgaaattattgtt
tgcacacctggtcgaatgattgacatgttagcagctaacagtggtcgggtcacaaatctt
cgaagagtgacatatgttgttttagatgaagcagatagaatgtttgacatgggtttcgaa
ccacaggtcatgcgcattgtggataatgtccgtcctgatcgacagacagtcatgttttca
gctactttccccagagctatggaggctctggctcgcaggatcctgagcaagcccattgaa
gtacaggttggaggcaggagtgtggtttgctcagatgtggaacagcaagtgattgtgatt
gaagaagaaaaaaagttcttgaaattgcttgagcttttaggccattatcaagagtcagga
tctgtcattatatttgtggataagcaggaacatgctgatggtcttctgaaggacttaatg
agagcatcctacccttgcatgtctctccatggaggtattgatcagtatgacagagatagc
atcataaatgactttaagaatggaacctgcaaacttcttgtggctacttctgtggctgct
cgtggtcttgatgtgaagcatctgattcttgtagtgaattacagctgccccaaccattat
gaagattatgtgcacagagctggacggactggaagagcaggcaacaaaggttatgcctat
actttcatcacagaagatcaagctcgatatgctggtgacataattaaagcccttgaattg
tcagggactgcagtgcctcctgatttggagaaactttggagtgatttcaaagatcagcag
aaagctgaaggaaaaataattaagaagagtagtgggttctctggcaagggattcaagttt
gatgaaacagaacaagctttggctaatgagaggaagaagttacaaaaagctgctcttggt
ttacaagattcagatgatgaggatgctgcagttgatattgatgaacaaattgaaagcatg
tttaattcgaagaagagagtaaaggacatggctgcacctggcacatctagtgtgcctgcc
cccacggcaggaaatgccgagaaactggaaattgcaaagagactggctctcagaatcaat
gctcagaagaatttgggcatcgagtctcaggatgtgatgcaacaagccaccaatgcaatt
ctcaggggtggcaccatactggctcccacagtgtctgcaaaaaccattgcagagcaactt
gctgagaagatcaatgccaagctcaattacgtgcctttagaaaaacaagaagaggagaga
caggatggtggacagaatgaatctttcaagagatatgaggaagagttagagatcaatgac
ttcccacagacggctaggtggaaagttacctctaaagaagctctgcagagaatcagcgag
tattctgaagcagcaattacaatcagaggaacgtacttccctcctgggaaagaacccaaa
gaaggagaacggaaaatttacttggcaattgaaagtgccaatgaattggctgttcagaaa
gcaaaggcagaaatcaccaggctcataaaagaagaactgatccgactgcaaaattcatac
caaccaacaaataaaggaagatataaagtattataa
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