Nannospalax galili (Upper Galilee mountains blind mole rat): 103749882
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Entry
103749882 CDS
T03372
Symbol
Blm
Name
(RefSeq) Bloom syndrome RecQ like helicase
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi03440
Homologous recombination
ngi03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
103749882 (Blm)
03460 Fanconi anemia pathway
103749882 (Blm)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ngi03032
]
103749882 (Blm)
03400 DNA repair and recombination proteins [BR:
ngi03400
]
103749882 (Blm)
Enzymes [BR:
ngi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
103749882 (Blm)
DNA replication proteins [BR:
ngi03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
103749882 (Blm)
DNA repair and recombination proteins [BR:
ngi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
103749882 (Blm)
Bloom's syndrome complex (BTR)
103749882 (Blm)
FA (Fanconi anemia) pathway
103749882 (Blm)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BLM_N
BDHCT_assoc
DEAD
BDHCT
Helicase_C
RecQ_Zn_bind
RQC
HRDC
ResIII
Motif
Other DBs
NCBI-GeneID:
103749882
NCBI-ProteinID:
XP_008850994
LinkDB
All DBs
Position
Un
AA seq
1410 aa
AA seq
DB search
MAAVPLNNLQEQLERHSARKFNNKFSLSKPKSSGFTFKKKTSEGDISITSMPVVKTPVLS
DKDVNVSGAFSFTEPLYQTPNQQTMTGDFFKNALAGQQTRDTCSDLSLPDLLQIPQEVLC
TTPNTPTVNKPYTAAFKKLEFNSSPDSSLNEWADMDDFDILSSKAFVTPSRNDFVRVSTA
QKSKKTKRNFFKPPPHKANTVKADLTLSSPESQQVDLTKEKKEELECLSSDVICIDDDPD
SKEFIKKATLESQPLKTCLGDERDNTEKNLAEVELHSAGKIPYIQHDYDYYDVDFVPPSP
EEEISTASSSLNCTSMLKDLDDSDKEKNILSTSNELSSKPEKIIPLERGPEASRDYKARE
ISVQQQLIHVMEHICKLVDTIPDDELKALNCGNELLQQRNIRRKLLAEADFNRNDISLLS
SVWTHGPDSLGNTMEGDSCPVGNPTKELNFPYLLSDSLSTGECLLTTTPGKTGFSATMKN
LFERPLLNSHLQKSFVSSNWAETPRTEKRNESSYFPGNVLTSTAVKDPNKHTDSENNSER
EIQASYNIDNFNIDDFDDDDDDWENIMHNLAANKPSTAAYPPIKEGGPVKSVSERISSAK
TNSLPVASTAQNKNFSESIYNYTDKLAQNLSSKNKKHEHFQSLNFPHTKEMMKIFHKKFG
LHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSPGVTIVISPLRSLIVDQV
QKLTSFDIPATYLTGDKTDSEAANIYLQLSKKDPIIKLLYVTPEKVCASNRLISTLENLY
ERKLLARFVIDEAHCVSQWGHDFRQDYKRMNMLRQKFPSVPVMALTATANPRVQKDILTQ
LKILRPQVFSMSFNRHNLKYYVLPKKPKKVAFDCLEWIRKHHPYDSGIIYCLSRRECDTM
ADTLQKDGLAALAYHAGLSDSARDAVQHKWINQDGCQVICATIAFGMGIDKPDVRFVIHA
SLPKSVEGYYQESGRAGRDGEISHCVLFYAYHDVTRLKRLIMTEKDGNYHTKETHFNNLY
SMVHYCENITECRRIQLLAYFGENGFDPDFCKKYPDVSCDNCCKTKDYKTRDVTDDVKNI
VRFVQEHSLSPGTRNISPSGRFTMNMLVDIFLGSKSAKIQSGIFGKGSAYSRHNAERLFK
KLILEKILDEDLYINANDQAIAYVMLGAKAQTVLNGHLKVDFMETENSSSMKKQKTLVAK
VSQREEVVKKCLGELTEVCKSLGKVFGVHYFNIFNTATLKKLAESLSSDPEVLLQIDGVT
EDKLEKYGAEMLPVLQRYSEWTLPAEDNSPGINLAGSRGTGRSMPDELDEGAPVSSHYFA
KQSRNERKRRKMPVSQRPKRRRTSYGGFKAKGGSTTCTKMSSKSKSSGVIGSSSASHGSQ
ATSGASRKLGIMAPPKPINRAFLRPAYAFS
NT seq
4233 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgttcctctgaataatctacaagagcaactggagcgtcactcagccagaaaa
tttaataataaattcagcctttcaaaaccaaaatcttcaggttttacttttaaaaagaag
acttcagaaggtgacatatctataactagtatgcctgtggtaaaaacaccagtgttaagt
gataaagacgtgaatgtttctggggccttttcattcactgagcctctgtaccaaacacca
aatcagcagacaatgactggtgacttcttcaaaaatgctcttgcaggacagcaaaccagg
gatacctgttcagacctgtcgctgccggacctattgcagattcctcaggaggttttatgt
actaccccaaacaccccaactgtaaacaaaccatacactgctgctttcaaaaaattagaa
tttaattcttcaccagattcttccctcaatgaatgggctgatatggatgactttgacatt
ttgtcttcaaaagcatttgttacaccgtccagaaatgactttgtaagagtaagcactgct
cagaaatcaaaaaagactaagaggaacttttttaaaccaccgcctcataaagcaaataca
gtaaaggctgatttgaccctttcctcccctgaaagccaacaagtggacttaactaaggaa
aagaaggaggaattggaatgcttaagcagtgatgtgatttgcattgatgatgaccctgat
tccaaagagttcataaagaaagctactctggaaagtcagcctttgaaaacttgtttggga
gatgaaagagataacactgaaaagaaccttgcagaagttgaattacattcagctgggaaa
attccatacattcaacatgactatgattattatgacgtagattttgttccaccttctcca
gaagaagaaatttctactgcttcttcctctttgaactgcactagtatgctaaaggatctt
gatgactcggacaaagagaaaaacattcttagcacatcaaatgagctttcatcaaaacca
gagaaaataattccactggagcggggtccagaagccagtagagactacaaagccagagag
ataagtgtacagcagcagcttattcacgtgatggaacacatctgtaaattagttgatact
attcctgatgatgaactgaaagctttgaattgtgggaatgagctgcttcaacaacgaaac
ataagaaggaaactcctagctgaagcagattttaatagaaatgatatcagtcttctgagt
tcagtgtggacacacgggcctgattcactcggtaacactatggagggtgattcctgccct
gtagggaatcctactaaagagttaaattttccataccttctctcagattctctttccact
ggggaatgtttactgaccaccactccaggaaagacaggattctcagctaccatgaagaat
ctctttgaaaggccgttattgaattcccatttacagaagtcctttgtaagtagcaattgg
gctgaaacaccaaggacagaaaaaagaaacgaaagctcttatttcccaggaaatgttctc
acaagcactgctgtgaaagatccgaataaacacactgattcagaaaataactcggaaaga
gaaatccaggcttcctacaacattgataattttaatatagatgactttgatgatgatgat
gatgactgggaaaatataatgcataatttagcagctaataaaccttccacagctgcctac
ccacctatcaaggaaggtgggccagttaaatcagtatcagagaggatttcttcagccaag
acaaactctcttccagtggcatctactgctcaaaataaaaacttctcagagtcaatttat
aattacactgataaattggcgcaaaatttatcatccaaaaataaaaaacatgagcacttt
cagagtcttaattttcctcatacaaaagaaatgatgaagatttttcataagaaatttggc
ttgcataattttagaactaatcagctagaggcgatcaatgctgcgctgcttggtgaagac
tgttttatcctaatgcccactggaggtggtaaaagtttgtgttaccagctacctgcttgt
gtttcccctggggtcactattgtcatttctcccttgagatcactaatagtagatcaagtc
caaaagctaacttcttttgatattccagctacgtatcttactggtgataagactgactca
gaagctgcaaatatttacctccagctatccaaaaaagacccaattatcaaacttttatat
gttactccagagaaggtctgtgctagtaaccggctgatttccactctggagaatctgtat
gagaggaagcttttggcacgttttgtcattgatgaagcgcattgtgtgagtcagtgggga
catgattttcgtcaagattacaaaagaatgaatatgcttcgccagaagtttccttctgtt
ccagtgatggccctcaccgccacagcaaatcccagggtccagaaggacatcctcactcag
ctgaagattctcagacctcaagtgtttagcatgagctttaacagacataacctgaaatat
tatgtgttaccaaaaaagcctaaaaaagtggcatttgattgcttagaatggatcagaaag
catcacccatatgactcagggataatttactgcctctcaaggcgggaatgtgacacaatg
gctgacaccttacagaaagatggtcttgctgctctggcttaccatgctggcctcagtgat
tctgccagagatgcagtgcagcacaagtggatcaatcaagacggctgccaggttatttgt
gcaacaattgcatttggaatgggaattgacaaacctgatgtgagatttgtgattcatgca
tctctacctaaatctgtggagggttactaccaagaatctggaagagctggaagggatggg
gaaatatcccactgtgtgctgttctatgcctatcatgatgtgaccagactgaagagactt
ataatgacggaaaaagatggaaattatcatacaaaagagactcacttcaataatttgtat
agcatggtacattactgtgaaaatataacagaatgcagaagaatacagcttttggcttac
tttggggaaaatggatttgaccctgatttttgtaagaaatacccagatgtttcttgtgac
aattgctgtaaaacaaaggattataaaacaagagatgtgactgatgatgtgaaaaatatt
gtaagatttgttcaagaacacagtttatcaccagggacaagaaatataagtccttctgga
agattcactatgaatatgcttgttgacattttcttggggagtaaaagtgcaaagattcag
tcgggtatatttggaaagggatctgcttattcacgacacaatgctgaaagactttttaaa
aagctgatattagagaagattttagatgaagacttatatatcaatgccaatgaccaagca
atcgcatatgtgatgctaggagctaaagcccaaaccgtgctaaatgggcatttaaaggtg
gacttcatggaaacagaaaactccagcagtatgaaaaaacagaaaactttagtggccaaa
gtctctcagagggaagaggtggttaagaaatgtcttggagagcttacagaggtctgcaaa
tcactggggaaagtctttggtgtgcattacttcaatatctttaatacagccacactcaag
aagcttgcagaatctttatcttctgatcctgaggttttgcttcagattgatggtgttact
gaagacaagctggaaaaatacggtgcagaaatgcttccagtattgcagagatactcagag
tggacattgccagctgaggacaattcccctggcataaacctagcaggcagcagaggcact
ggaaggagcatgccggacgagcttgatgagggtgcccctgtgtcctctcactactttgca
aaacaatccagaaatgaaagaaagagaaggaaaatgcctgtttcccagaggcctaagagg
agaagaactagttacggtggcttcaaggcaaagggggggtctaccacgtgcacaaaaatg
tcttctaaaagtaaatcctctggtgtaattggatccagctcagcctcacatggttctcaa
gcaacatcgggagccagtagaaaattggggattatggctccaccaaagcctataaataga
gcgttcctcaggccggcgtatgcgttttcctaa
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integrated database retrieval system
