Nannospalax galili (Upper Galilee mountains blind mole rat): 103750029
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Entry
103750029 CDS
T03372
Symbol
Col4a6
Name
(RefSeq) collagen type IV alpha 6 chain
KO
K06237
collagen type IV alpha
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi04151
PI3K-Akt signaling pathway
ngi04510
Focal adhesion
ngi04512
ECM-receptor interaction
ngi04820
Cytoskeleton in muscle cells
ngi04926
Relaxin signaling pathway
ngi04933
AGE-RAGE signaling pathway in diabetic complications
ngi04974
Protein digestion and absorption
ngi05146
Amoebiasis
ngi05165
Human papillomavirus infection
ngi05200
Pathways in cancer
ngi05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
103750029 (Col4a6)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103750029 (Col4a6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
103750029 (Col4a6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
103750029 (Col4a6)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
103750029 (Col4a6)
09154 Digestive system
04974 Protein digestion and absorption
103750029 (Col4a6)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
103750029 (Col4a6)
09162 Cancer: specific types
05222 Small cell lung cancer
103750029 (Col4a6)
09172 Infectious disease: viral
05165 Human papillomavirus infection
103750029 (Col4a6)
09174 Infectious disease: parasitic
05146 Amoebiasis
103750029 (Col4a6)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
103750029 (Col4a6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ngi04147
]
103750029 (Col4a6)
00536 Glycosaminoglycan binding proteins [BR:
ngi00536
]
103750029 (Col4a6)
Exosome [BR:
ngi04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
103750029 (Col4a6)
Glycosaminoglycan binding proteins [BR:
ngi00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
103750029 (Col4a6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
103750029
NCBI-ProteinID:
XP_008851186
UniProt:
A0A8C6W2H8
LinkDB
All DBs
Position
Un
AA seq
1690 aa
AA seq
DB search
MHPGLWLLLVSLCLTQELAEAGQKSYGKLCGEQDCSGGCKCSPEKGARGRPGPTGIQGPA
GPEGLAGPTGLSGLKGERGSPGLLGPYGLKGDKGPMGVPGFLGINGILGHPGQPGPRGLP
GLDGCNGTQGDVGFPGPVGYPGILGPPGLPGRKGSKGEPAPFQGSITGMKGDPGLPGLDG
ISGPSGSPGSPGGAGPIGSPGLQGPPGPPGLPGPDGNMGLGFQGEKGMKGDVGLPGPAGP
PPSTGELEFMGFPKGKKGSKGEPGPPGFPGMSGPPGFLEFGSIGEKGEKGILGLPGPRGP
MGSEGEEGYPGEQGKKGSSGLPGFTGFPGIKGEKGGIGLPGPDIFTDVHGAAISGSPGDP
GIPGLPGIRGDEGIQGQRGPSGTPGLPALTGLQGTLGLRGPPGLKGDQGNPGRSTTGETG
LPGRVGLPGLPGLPGPSGPLGTTFETGTLPITEPGFPGFQGERGAKGNPGLQGAKGDSGS
CACEVGVPNTGPPGEPGLPGIQGLIGLPGIKGTRGDPGSVGAPGPAGTPGLFGPPGHTGP
KGKKGEPTISRGSKMSGDKGDPGPKGFPGIAGAAGKDGIPGLPGLPGLQGDSGLGFPGEK
GSPGLPGKKGPDGPTGPPGIGLPGLPGPRGLPGNKGVDGLPGQQGLRGAQGVTLPCIIPG
SYGPSGFPGAPGFPGSKGARGLPGTPGQPGIHGSKGEPGSPGFIHLPELPGFPGPHGEKG
LPGFPGLPGKDGLPGKAGSPGLPGSKGATGDTFGAENGASGEQGLHGLPGDKGFPGDSGL
PGPKGLNGKSGLLGPKGERGIPGASGSVGQPGPLGSSDPFGIKGTSGLPGAPGLPGISGH
PGKKGLRGEMGHPGSTGKRGLPGIKGLPGSPGSPGFLGNPGLSGVTGLPGLPGQKGEKGA
SGPIGFPGLPGLPGIPGASGLKGLPGSVGKVGQFGQAGSPGEKGDRGDPGPVGMPISRPP
MLNLWFKGDKGSRGSAGLDGFPGPRGEKGKPGRPGSPGSPGAPGQPSTIKGLSGRPGSPG
SIGLQGFPGLKGSLGITGFPGMPGKIGSQGFIGASGPQGASGIPGLKGDQGQTLEISGIP
GPKGQPGESGFKGVKGKDGPVGDTGYPGVKGEDGKVGITGDTGLPGSPGPQGITGMRGDP
GLPGSSGHPGSTGSPGSSGLIGPKGFSGPPGLHGLNGLPGTKGTHGTPGVSVTGVPGPAG
LPGPKGQKGTPGIVIGDPGKPGSRGQKGDRGFPGLQGPAGPPGAPGISLPSVIAGQPGDP
GRPGLDGERGRPGNPGPPGPPGPSWDQGDPGDPGFPGIAGLQGPKGNQGFPGFSGLPGDL
GLKGVKGEPGFMGTPGKVGPPGDPGFPGMKGKVGTRGFAGPQGAPGHTPIAEAVQVPPGP
LGLPGIDGIPGLTGEPGIQGPVGLQGSKGLPGIPGKDGSSGLPGPPGTLGDPGLPGLQGP
PGFEGAPGQQGPFGRPGVPGHSVRVGYTLVKHSQSEQVPLCPVGMSQLWVGYSLLFVEGQ
EKAHNQDLGFAGSCLPRFSTMPFIYCNINEVCHYARRNDKSYWLSTTAPIPMMPVGQTQI
PQYISRCSVCEAPSQAIAVHSQDVTIPQCPLGWRSLWIGYSFLMHTAAGAEGGGQSLVSP
GSCLEDFRATPFIECSGARGTCHYFANKYSFWLTTVEERQQFREEPVSETLKAGQLHSRV
SRCQVCMKSL
NT seq
5073 nt
NT seq
+upstream
nt +downstream
nt
atgcaccctgggttgtggctgctcctggtttccttgtgcctgacccaagaactggcagaa
gcgggacagaagtcctatggaaagctgtgtggggagcaagactgcagtggaggttgcaaa
tgctctcctgagaaaggagcaaggggacgccctggaccaactggcattcaaggtccagca
ggtcctgaaggacttgctggtcctactggtttatcggggttgaaaggagaaagaggctcc
ccaggccttctgggaccatatggactaaaaggagataaaggtcccatgggagttcctggc
tttcttggcatcaatgggattctgggccaccctggacagccaggccccagaggtttacca
ggcctagacggctgtaatggaactcaaggagatgttggatttccaggccctgttggctat
cctgggattttaggaccacctgggctgcctggtcggaaaggttcaaaaggggaacctgct
ccttttcaaggtagcatcacaggaatgaagggggatcctgggctgcctggactagatgga
atctctggtccatcaggatcccctggatctcctggaggtgcaggacccataggatcacca
ggcttacaaggtcctccaggcccccctggactccctggccctgatggaaatatggggtta
ggtttccaaggagaaaaaggaatgaagggggatgttggcctccctggccctgctggacca
cctccatctactggtgaactagagttcatgggatttcctaaagggaagaaaggatccaag
ggtgaaccagggcctccaggtttcccaggcatgagtggccctccaggcttcctggaattt
ggatctattggagaaaaaggagaaaagggaatccttggtttgccgggacctaggggtccc
atgggttcagaaggagaagaaggctatccaggggaacagggaaaaaagggatcatctggt
ttacctggatttactgggttcccaggaattaagggtgaaaagggtggcattggtctgcca
ggcccagacattttcactgatgtgcatggtgctgcgatctcaggttctcctggagacccc
ggtataccaggcctcccaggcattagaggagatgaaggcatccaaggccaacgtggccct
tctggcacccctggcctcccagccctaacaggtcttcaaggcaccctagggcttcgggga
cctccaggcctcaagggagaccaaggcaacccaggccgcagcaccactggggagactggc
ctgcctggcagagttggtttaccaggtttaccaggcttgccaggcccatcaggtccactt
ggtaccacatttgagactggaactctgcctatcacagaacctggattccctggtttccaa
ggagaacgaggtgcaaaaggaaatccaggactccaaggagcaaaaggggactctggttct
tgtgcatgtgaagttggtgtccccaacactggaccacctggggaaccaggtctgcctggg
atacaaggtctcatcggcctcccaggcattaaagggaccagaggagatccaggctctgta
ggtgcacccggcccagcagggactccagggttatttggacctccaggtcatacaggcccc
aaaggaaagaaaggtgaaccaaccatcagtcgaggatcaaaaatgtcaggagacaaaggt
gatcctggtcctaaggggttcccaggtatagcaggagctgcaggcaaggatggaatacca
ggtttaccaggtctgccaggccttcagggagatagtggacttggattcccaggtgaaaag
gggtcaccaggacttcctggtaaaaagggtcctgatggtccaactggccccccaggaatt
gggctgccaggacttcctggaccacgtgggcttcctggaaataaaggagtagatgggttg
ccagggcaacaaggcctccgtggagcccaaggagtcaccttgccttgtattattcccggg
tcgtatggtccatcaggatttcctggagctcctggattcccaggctcaaagggggcccgg
ggcctccctgggactccaggccagcctggcattcatggaagtaaaggagagcctggaagc
ccaggatttattcatctcccagaattaccaggatttcctggacctcatggggagaagggc
ttgcctgggtttcctgggcttcctggaaaagatggcttgcctgggaaggctggcagtcca
ggtttaccaggttccaagggagccactggtgacacctttggtgctgaaaatggtgcttca
ggggagcaaggcctacatggattgccaggggacaaaggatttcctggagactctggcctt
ccaggacccaagggtttgaatgggaagtctggtttgctaggccccaaaggtgaacggggc
atccctggagcatcaggatcagtgggacagccaggacccttaggatctagtgacccattt
ggcatcaagggcacatctggccttccaggagcaccaggcctcccaggcatttcaggacat
cctggaaagaaaggtctaagaggagagatgggtcaccctggatcaactggaaaacgaggt
ctacctgggataaaaggccttcctggttctccagggtcacctggcttcttggggaaccca
ggcttgtctggggtcactgggttgcctggcctcccaggccaaaagggtgaaaagggagcc
tctggaccaataggttttcctgggttgccaggtcttcctggtattcctggagcaagtgga
ttaaagggacttcctgggtcagttggcaaggtgggacaatttggacaggctggtagtcct
ggcgaaaaaggagacaggggtgatccagggccagttggaatgcccatttcaagacctcca
atgctgaacctttggttcaaaggagacaagggctctcgaggttctgccggattggatgga
ttccctgggcccagaggtgaaaaaggaaagcctgggagaccagggtcaccaggttcacct
ggagctcctggacagcccagtacaatcaaaggacttagtgggaggccaggttcccctggc
tccataggattacaaggttttcccggcctgaagggatccctggggatcacaggtttccca
ggaatgccaggaaaaattggttcacaaggttttattggagcttctggaccccagggagca
tctggtatcccaggcctaaaaggagatcagggccaaacacttgaaatttctggtatccca
ggacccaaggggcaacctggtgaatcgggttttaaaggtgtaaaaggaaaagatggacca
gttggtgatactggttaccctggagtcaaaggtgaagatggaaaagttggtattactggc
gatactggccttcctggctccccaggacctcaagggattacagggatgagaggagaccca
ggactcccaggttcttctggccatccagggtcaactggctcccctggatcctctggctta
ataggacctaaaggattctctggacctcctggtttacatggactaaatggacttccaggc
accaagggtacccatggcactccaggagtgagcgtcactggtgtgcctggacctgctggc
ttgcctggtcccaaagggcaaaagggaacaccaggaattgtcatcggagatccagggaaa
ccaggttcaagggggcaaaaaggtgaccgaggtttcccaggtcttcaaggccctgctggt
ccccccggagccccaggcatctccttgccctcagtcatagcaggacagcctggcgacccc
gggcggccaggcctagatggagaacgaggccgcccaggtaaccccgggcctccaggtccc
cctgggccatcctgggatcaaggcgaccctggagaccctggcttccctggaattgcaggc
cttcaggggcccaaggggaaccaaggatttccaggtttctctggcctccctggagatcta
gggctgaaaggcgtgaaaggggagcctggcttcatggggactccaggcaaggttgggcca
ccaggagacccaggatttcctggaatgaaagggaaggtggggacaagaggctttgccggc
ccccagggagcacctggacatacaccaattgctgaagctgtccaggttccccctggaccc
ctgggcctgccaggcatcgatggcatccctggtctcacaggggagcctgggattcaaggc
cctgtgggtctgcaaggctccaaaggtctacctggcatccctggaaaggatggctccagt
gggcttccaggcccacctggtacccttggtgatcccggtctccccggactacaaggccca
ccaggatttgaaggagctccagggcagcagggcccctttgggaggcctggagtgcctggg
cacagtgtgagagtgggctacacactggtgaagcacagtcaatcagaacaggtgcccctg
tgccccgtcgggatgagccagctatgggtgggttacagcttgctgttcgtggagggacag
gagaaagcccataaccaggacctgggatttgctggctcctgcctaccccgcttcagcacc
atgcccttcatctactgcaacatcaatgaagtctgccactatgccagacgcaatgataaa
tcctactggctctccactactgcccccattcccatgatgcctgtgggccagacccagatt
ccccaatacatcagccgctgctctgtatgtgaagcaccctcacaagccattgctgtgcac
agccaggatgtcaccattccacagtgccctctgggctggcggagcctctggattgggtac
tccttcctcatgcacactgctgctggggcggagggcggaggccaatccctggtctcccct
ggctcctgccttgaggatttccgggctactcctttcatcgaatgcagcggtgcccgaggt
acctgccactactttgccaacaagtacagtttctggctgacaaccgtggaggagaggcag
cagtttagggaagaacctgtgtctgagacactgaaggctgggcagctgcacagcagggtg
agccgctgccaggtgtgtatgaaaagcctataa
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