Nannospalax galili (Upper Galilee mountains blind mole rat): 103751618
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Entry
103751618 CDS
T03372
Name
(RefSeq) protein patched homolog 1
KO
K06225
patched 1
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi04024
cAMP signaling pathway
ngi04340
Hedgehog signaling pathway
ngi04360
Axon guidance
ngi05200
Pathways in cancer
ngi05205
Proteoglycans in cancer
ngi05217
Basal cell carcinoma
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
103751618
04024 cAMP signaling pathway
103751618
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
103751618
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
103751618
05205 Proteoglycans in cancer
103751618
09162 Cancer: specific types
05217 Basal cell carcinoma
103751618
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Patched
Sterol-sensing
MENTAL
Motif
Other DBs
NCBI-GeneID:
103751618
NCBI-ProteinID:
XP_008853343
UniProt:
A0A8C6QM27
LinkDB
All DBs
Position
Un
AA seq
1443 aa
AA seq
DB search
MASAGNGEPQDRGGGCIGALGRQAGGGRRRRTGGPRRAAPDPDYLHRPSYCDAAFALEQI
SKGKATGRKAPLWLRAKFQRLLFKLGCYIQKNCGKFLVVGLLIFGAFAVGLKAANLETNV
EELWVEVGGRVSRELNYTRQKIGEEAMFNPQLMIQTPKEEGANVLTTEALLQHLDSALQA
SRVHVYMYNRQWKLEHLCYKSGELITETGYMDQIIEYLYPCLVITPLDCFWEGAKLQSGT
AYLLGKPPLRWTNFDPLEFLEELKKINYQVDSWEEMLNKAEVGHGYMDRPCLNPADPDCP
ATAPNKNSTKPLDMALVLNGGCQGLSRKYMRWQEELIVGGTVKNSTGKLVSAHALQTMFQ
LMTPKQMYEHFKGYDYVSHINWNEDKAAAILEAWQRTYVEVVHQSVAPNSTQKVLSFTTT
TLDDILKSFSDVSVIRVASGYLLMLAYACLTMLRWDCSKSQGAVGLAGVLLVALSVAAGL
GLCSLIGISFNAATTQVLPFLALGVGVDDVFLLAHAFSETGQNKRIPFEDRTGECLKRTG
ASVALTSISNVTAFFMAALIPIPALRAFSLQAAVVVVFNFAMVLLIFPAILSMDLYRRED
RRLDIFCCFTSPCVNRVIQVEPQAYTEPHSNTRYSPPPPYSSHSFAHETHITMQSTVQLR
TEYDPHTHVYYTTAEPHSEISVQPVTVTQDILSCQSPESASSTRDLLSQFSDSSLHCLEP
PCTKWTLSSFAEKHYAPFLLKPKAKVVVILLFLGLLGVSLYGTTRVRDGLDLTDIVPRET
REYDFIAAQFKYFSFYNMYIVTQKADYPNIQHLLYDLHKSFSNVKYVMLEENNQLPKMWL
HYFRDWLQGLQDAFDSDWETGKIMPNNYKNGSDDGVLAYKLLVQTGSRDKPIDISQLTKQ
RLVDADGIINPSAFYIYLTAWVSNDPVAYAASQVNIRPHRPEWVHDKADYMPETRLRIPA
AEPIEYAQFPFYLNGLRDTSDFVEAIEKVRTICNNYTRLGLSSYPNGYPFLFWEQYISLR
HWLLLAISVVLACTFLVCAVFLLNPWTAGIIVMVLALMTVELFGMMGLIGIKLSAVPVVI
LIASVGIGVEFTVHVALAFLTAIGDKNRRAVLALEHMFAPVLDGAVSTLLGVLMLAGSEF
DFIVRYFFAVLAILTILGVLNGLVLLPVLLSFFGPCPEVSPANGLSRLPTPSPEPPPSVV
RFAVPPGHMNNGSDSSDSEYSSQTTVSGISEELRHYEAQQGTGGPAHQVIVEATENPVFA
RSTVVHPESRHHPPSNPRQQPHLDSGFLPSGRQDQQSCRDPPREGLRPPPYRPRRDAFEI
STEGHSGPSNRDCSGPRGARSHNPRNLASTAIGSSMPSYCQPITTVTASASVTVAVHPPP
GPGRNPRGGPCPGYQSYPETDHGLFEDPHVPFHVRCERRDSKVEVIELQDVECEERPWGS
SSN
NT seq
4332 nt
NT seq
+upstream
nt +downstream
nt
atggcctcggctggtaacggcgagccccaggaccgcggcggcggctgtatcggggccctg
ggccggcaggcgggcggcgggaggcgaagacggaccgggggaccgcgccgcgccgcgcca
gacccggactatctgcaccggcccagctactgcgacgccgccttcgctctggaacagatt
tccaaggggaaggctactggccggaaagcgccgctgtggctgcgagcgaagtttcagaga
ctcttatttaaactgggttgttacattcaaaaaaactgcggcaagttcttggttgtgggc
ctgctcatttttggggccttcgctgtgggattaaaggcagctaatctggagaccaacgtg
gaggagctgtgggtggaagttggtggacgagtgagtcgtgaattaaattatacccgccag
aagataggagaagaagctatgtttaatcctcagctcatgatacagaccccaaaagaagaa
ggtgctaatgtcctaaccacagaagcgctcttgcaacacctggactctgcgctccaggcc
agtcgagtgcatgtctacatgtacaacaggcaatggaaattggaacacttgtgctacaag
tcaggagaacttatcacagaaacaggttatatggatcagataatagaatatctttaccct
tgcttagtcattacacctttggactgcttctgggaaggggcaaaattacagtccgggaca
gcatacctcctaggtaaacctcctctgcggtggacaaactttgaccctttggaattccta
gaggagttaaagaaaataaactatcaagtggacagttgggaggaaatgctcaataaagct
gaagttggccatgggtacatggaccgtccctgcctcaacccagcagacccagattgcccc
gccacagcccccaacaaaaattcaaccaaacctcttgatatggcccttgttttgaatggt
ggatgtcagggattatccaggaagtatatgcgctggcaggaggagctgattgtgggtggc
acagtcaagaacagcactggaaaactggtcagtgcccatgccctgcagaccatgttccaa
ttaatgactcccaagcaaatgtatgagcacttcaagggctatgattatgtctcccacatt
aactggaatgaggacaaagcagcagctatcctagaggcgtggcagagaacgtatgtggag
gtggttcatcagagtgttgccccgaactccactcaaaaggtactttccttcaccaccacg
accctggacgacatcctaaaatcattctctgatgtcagcgtcatccgagtggccagtggc
tacttattgatgcttgcctatgcctgtttaaccatgctgcgctgggactgctccaagtcc
cagggtgccgtggggctggctggcgtcctgttggttgcactgtcagtggctgcaggattg
ggcctgtgctcattgatcgggatttcctttaacgctgcgacaactcaggttttgccgttt
cttgctctgggtgttggtgtggatgatgttttccttctggcacacgcattcagtgaaaca
ggacagaataaaaggatcccttttgaggacaggacaggggagtgcctcaagcgcacagga
gccagcgtggccctcacctctatcagcaatgtgactgccttcttcatggccgcattaatc
cctattcctgctctgcgagcattctccctccaggctgcagtagtagtggtgttcaacttt
gccatggtgttgctcatttttcctgcaattctcagcatggacttatatcgacgtgaggac
aggagattggatattttctgctgttttacaagcccctgtgtcaacagagtgattcaggtt
gaaccacaggcctacacagaacctcacagcaacacccgctacagccccccacccccctac
agcagtcacagctttgcccatgaaacacacatcaccatgcagtccactgttcagctccgc
acagagtacgaccctcacacacatgtgtactacactaccgccgagccgcactccgagatc
tccgtgcagcctgtcactgtcacccaggacatcctcagctgccagagccccgagagtgcc
agctccaccagagatctgctctcccagttctcagactccagcctccactgcttggagccc
ccctgcaccaagtggacactctcgtcatttgcagagaaacactatgctcctttcctcttg
aaacccaaagccaaggttgtggtgatcctccttttcctgggcttgctgggggtcagcctt
tatgggaccacccgagtgagagacgggctggaccttacagacattgtccctcgggaaacc
agagagtatgactttattgctgcgcagttcaaatacttttctttctacaatatgtatata
gtcactcagaaagcagactacccaaatatccagcatttactttatgaccttcacaagagt
ttcagcaatgtgaagtatgtcatgctggaagaaaacaatcagctgcccaagatgtggctg
cactacttcagagactggctccaaggacttcaggatgcgtttgacagtgactgggaaact
gggaagatcatgccaaacaattacaaaaatggatctgacgatggggtcctcgcctacaaa
ctcctggtgcagaccggcagccgggacaagcctattgacatcagtcagttgactaaacag
cgtctggtggatgcagatggcatcattaatcccagcgctttctacatctacctgacggct
tgggtcagcaatgaccccgtggcttacgccgcctcccaagtcaacattcggcctcatcga
ccagagtgggtccacgacaaagctgactacatgccagaaaccaggctgagaatcccagca
gcagagcccattgaatatgctcagttccctttctacctcaacggcctacgagacacctca
gacttcgtagaagccattgaaaaagtaagaaccatctgcaacaactacacgcgcctgggg
ctgtccagctaccccaacggctaccccttcctcttctgggagcagtatatcagcctgcgc
cactggctgctactggccatcagtgtggtgctggcctgcacgtttctcgtgtgtgcagtc
ttcctgctgaacccctggacggccgggatcattgtgatggtcctggctttgatgacagtt
gagctctttggcatgatgggcctcattggaatcaagctgagtgctgtacctgtggtcatc
ctgattgcgtctgttggcatcggagtagaattcaccgtccacgtggctttggcctttctg
acagcaattggtgacaagaaccgcagggccgtgcttgccttggaacacatgtttgcacct
gttctggatggtgctgtgtccactctgctgggagtactgatgctggcggggtctgaattt
gatttcattgtcaggtacttctttgctgttctggcgatcctcaccatcctgggagttctc
aatggactggtgctgcttcctgttctcttatcattctttggaccatgtcctgaggtgtct
ccagccaatggcctgagccggctgcccaccccttcacctgagccacccccaagtgttgtc
cggtttgcagtgcctcctggtcacatgaacaatgggtctgattcctctgactcagagtac
agttctcagacaacagtgtccggcatcagtgaggagcttaggcactatgaggcacagcag
ggcactggaggccctgcccaccaagtgatcgtggaagccacagaaaaccctgtcttcgcc
cggtccactgtggtccatcctgaatcgaggcatcaccctccctctaaccctcgacagcag
cctcacctggactcgggcttcctgccctctggacggcaagaccagcagtcttgcagggac
ccccccagagaaggcttgcggccaccaccctacagaccgcgcagagacgcttttgaaatt
tctactgaagggcattctggccctagcaatagggactgctcgggcccccgtggggctcgt
tctcataaccctcggaacctagcgtccactgccataggcagctccatgcccagctactgc
cagcccatcaccactgtgacggcttctgcttctgtgactgttgctgtgcatcccccacct
gggcctgggcggaacccccgggggggaccctgcccaggctatcagagctatcctgaaact
gaccacgggctgtttgaggacccccatgtgccttttcacgtccggtgcgaaaggagggac
tcaaaggtggaagttatagagctgcaggatgtggaatgtgaggagaggccgtggggaagc
agctccaactaa
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integrated database retrieval system
