Neorhizobium galegae bv. officinalis bv. officinalis HAMBI 1141: RG1141_CH11950
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Entry
RG1141_CH11950 CDS
T03208
Name
(GenBank) Putative hydrolase of the metallo-beta-lactamase superfamily
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
ngl
Neorhizobium galegae bv. officinalis bv. officinalis HAMBI 1141
Pathway
ngl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ngl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RG1141_CH11950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngl03019
]
RG1141_CH11950
Messenger RNA biogenesis [BR:
ngl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
RG1141_CH11950
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GFIT
Motif
Pfam:
RNase_J_C
Lactamase_B_2
Lactamase_B
RMMBL
Lactamase_B_3
Motif
Other DBs
NCBI-ProteinID:
CDN53550
UniProt:
A0A068T882
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Position
1143770..1145437
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AA seq
555 aa
AA seq
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MANQEELVFLPLGGVGEIGMNLALYGYGTPEKRQWIMVDCGVTFPGPDLPGVDLVLPDIR
FLASQRSHLKAMIITHAHEDHYGAMNDLWPGLNVPVYASPFTAGMLEAKRNYEGSRAEIP
VTIFKAGDRINIGPFEIEAVGVNHSIPEPMSLVIRTPLGNVVHTGDWKIDHAPSLGPFTD
EARFRKIGDEGVLALMCDSTNSMREGVSPSEEEVSEGLRQIIEAAEGRVAITTFSSNVGR
IRSIAQAADAAGREVLLLGSSLKRVVGVARDIGIMEGLKPFIAEDEYGYIPRDKIVVILT
GSQGEPRAALAKIARDEMRHVALTSGDTVVFSSRTIPGNEKAIIEIKNGLIEQGIKIVTD
SDALVHVSGHPRRSELVQMYQWTRPQILVPVHGEAAHLTAQAELGASAGIKTIPRVRNGN
ILRLAPGPAEVIGDAPHGRIFKDGKLIGDFEEMGIGDRRKLSFVGHVSVNVLLDTRYDFV
TDPDLIAFGLPEFDDEGEDMEDTLYDAVLGAVESIPRARRKDLDMVREAIRRAVRSTANE
AWGKKPIVTVFVTRL
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaccaagaagaactggtgtttctgccgcttggcggcgtcggcgagatcggcatg
aacctcgccctctacggctatggaacgccggagaagcgccagtggatcatggtcgattgc
ggcgtgacctttccgggaccggatctgccgggcgttgatctcgtgctgccggatatccgc
ttcctcgccagccagcgcagccatctcaaggcgatgatcatcacccatgcgcacgaggac
cactacggcgcgatgaacgatctgtggccgggcctcaacgtgcccgtctatgcctcgccg
tttaccgccggcatgctggaggcgaaacgcaactacgaaggttcgcgcgctgaaatcccg
gtgacgatcttcaaggccggcgaccgcatcaatatcggcccgttcgagatcgaggccgtt
ggcgtcaaccattcgatccccgagccgatgtcgctggtcatccgcaccccgctcggcaat
gtcgtccataccggcgactggaagatcgatcacgcgccgtcgctcggaccgttcaccgac
gaggcgcgcttccgcaagatcggtgacgaaggcgtgctggcgctgatgtgcgacagtacc
aactccatgcgcgagggcgtttcgccatcggaagaggaagtctccgaaggcctgcgccag
atcatcgaggcggccgagggcagggtagcgatcaccaccttctcgtcgaatgtcggccgc
atccgctcgatcgcccaggctgcggacgccgccggccgcgaagtccttttactcggctcc
tcgctgaaacgcgtcgtcggcgtcgcccgcgatatcggcatcatggaaggcctgaagccc
ttcatcgccgaggacgaatacggctatatcccgcgtgacaagatcgtggtgatcctgacc
ggcagccagggcgaaccgcgcgcggcccttgccaagatcgcccgcgacgagatgcgccat
gtggcgctgacgtcaggcgatacggtggtcttttcctcgcgcaccattcccggcaacgaa
aaggcgatcatcgagatcaagaacggcctgatcgagcaggggatcaagatcgtcaccgac
agcgacgcgctcgtccacgtctccggccacccgcgccgcagcgaactggtgcagatgtac
caatggacccgtccgcagatcctcgtgcccgttcacggcgaggccgcgcatctgacggcc
caggccgagctcggcgcatccgccggcatcaagaccattccgcgggtccgcaacggcaat
atcctgcgccttgcgcctggcccggccgaggtcatcggcgatgcgccgcatggccgcatc
ttcaaggacggcaagctgatcggcgatttcgaggaaatgggcatcggcgaccgccgaaag
ctctctttcgtcggccatgtctccgtcaacgtcctgctcgacacccgttatgacttcgta
accgatcccgatctcatcgccttcggtctgccggaattcgacgacgagggtgaggacatg
gaggatacgctttatgacgccgtgctcggcgccgtcgaaagcatcccgcgcgcgcgccgc
aaggatctcgacatggtccgcgaggcgatccgccgcgccgtccgctccaccgccaacgag
gcctggggcaagaagccgatcgtgacggtgttcgttacgcgtctctga
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