KEGG   Naegleria gruberi: NAEGRDRAFT_59151
Entry
NAEGRDRAFT_59151  CDS       T01241                                 
Name
(RefSeq) hypothetical protein
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
ngr  Naegleria gruberi
Pathway
ngr03030  DNA replication
ngr03410  Base excision repair
ngr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ngr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    NAEGRDRAFT_59151
   03410 Base excision repair
    NAEGRDRAFT_59151
   03420 Nucleotide excision repair
    NAEGRDRAFT_59151
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ngr03032]
    NAEGRDRAFT_59151
   03400 DNA repair and recombination proteins [BR:ngr03400]
    NAEGRDRAFT_59151
Enzymes [BR:ngr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     NAEGRDRAFT_59151
DNA replication proteins [BR:ngr03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    NAEGRDRAFT_59151
DNA repair and recombination proteins [BR:ngr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      NAEGRDRAFT_59151
SSDB
Motif
Pfam: DUF1744 DNA_pol_B_exo1 DNA_pol_B DNA_pol_B_exo2 RNase_H_2 DUF1818
Other DBs
NCBI-GeneID: 8854191
NCBI-ProteinID: XP_002672840
JGI: Naegr1_59151
UniProt: D2VT72
LinkDB
AA seq 2160 aa
MYTNKSNNKPRLLNKPTKKKGDHGSQQERLDDDEKAQQLKEYREKKKLEEIEIDKRFFGP
QMEGTKNLGWLVNFRATSVPEKLTMGGSGGEDDANSSDMDLAAVVLYFMSDEGDSFSVTK
VFEPYFYIAVKDDNSFTEVCNYLTSMDPIVSLDIVDKEDLDKVNHLSGIKAKYLKLRFKN
VQQLMEMRSKLLPIIEKNKKKSQDSFELLEEELLNEEMEDQFLDDLDDYERGIRRKRKAK
LSTIDCVDKIVDIREYDIKYHIRCAIDTDLRVGYWYDISVEEGNVLISKREDIEERAVPK
VCAFDIETTKPPLMFPDPQSDRIMMISYMIDGHGYLIVNREIVAEDIENFDYTPKDEFPG
YFEVFNVENEKELLLKWFSHMQEEKPCVYVTYNGDFFDWPFIEQRASVYSLNLRDHVGYY
RMSGDCKKLGSDTLYGSSFGLHIDCLYWVIRDSYLPQGSHGLKAVTKAKLKYDPIEVDPE
DMLPFATSQPQKLASYSVSDAVSTYYLYMKYINPFIFSLCNIIPMPPDEVLRKGSGTLCE
TLLMVQAFKGNIIFPNRYQSDPEKMYKGHLLASETYIGGRVEGLKSGVYRSDIPYKFKLN
PDRYQQLVDNVDRVIRFAIEVEQQLKVEDVANFEELKQEIIDGLLKLKEKPEREECPKLY
HLDVGAMYPNIILTHRLQPSAIVNEDTCAQCIYNKPENDCKRIMKWHFRAEYFTASRSEF
NIAKNSLMNDNPNFTNEELRKRVGEISQKAHKKKYNKESMVKDATICQRENPFYVNTVRE
FRDRRYVLKDKSKEWKDKSKDPEFEEKSKVMLVLYDSLQLAHKCILNSFYGYVMRKAARW
YSMEMAGVVTYNGAQIIRMARELIDDIGISLELDTDGIWCMLPGSFPENYTLKLTNGKKR
TISYPCLMLNADVAQNFSNDQYQNFNPETGKWDKRAECSIFFEVDGPYRAMILPASKEEG
KSIKKRYAVFNHDGTLAELKGFEIKRRGELKLIKIFQSQVFEQFLKGYSLSECYQHVAEI
ANRWLDILYTKGEGIETKQLFDYITESSNMSKRLEEYGNQKAARITAAKRLVDLFGEQMV
RDKGLVCSYIVAKKPENASVTERVIPTVVFQKEESVCLSFLKKWTKDTSMTEIDLKEIVD
WDYYIERLGSAIQKIITIPAALQAIDNPVPRVKHPDWLLKKLRENASQSKQRSLMDMLKK
IPVTEDSSSDSDEEMEDASGDEKPKSKSTKRKIDDVDDDSLGEEVGQKRKKKKKKNKTKK
SKSSDGNTLVNDGTMASYVQFYSNQLKDLVWHVIEVRESETPGLLKLFISVGGKMRTFKI
EVPRVVYLNFYQKQGESEEPHKKLPILSSQLVETSVANKRDTFLYRKELLESYYQKNLQT
IYSEFSNPHIQGVYETQIDPVLRAVLSIGSLCQVHPKSREKIDSANTLTVSDLVQVDGSH
SKKNPGVSYLKDVTNLQKLYLFESCCDVRGVIGLFSFANKKAYIYLIHSIDLQTTGLHPD
RLFDEVLDQIIEQSNLNITEIEEFELDVFKNRVDVLKEINNILAKERKASSLLLVQSPFS
YQTHSASEIAPMLEEIPIVAIPFSEEDNKYQHALSAYWTNNCIKQMFIRYCAIEKWYKDM
TNYSNYCGIPIGNIESNDFVMHLIDMMFGRSLQNDYVLWLSKANKPDLGGCENDALQQQA
LLSDDQLYSRSGTFINHSACYHSVCVEFDISHLDINAILQSSFIEETIDDKISNSSKFST
VTEIFKIFKQVVSKMFADVHNDDNTCPDVPDLLLSNLYRWCCNTHAKLFHPEILAFIYRL
QKKVFLQLCAHFKKCGCRIIYANFTKIIVDTGKNTTDEAKVYTDYLKSSIQQQKLFTWVD
IEVKNTWSNLLWFNQDNFLGFKEDQETETGLSSDPHIDLLSELPESVRVHLVFYLSTYMY
ECLKYRRSLDEKISTMKAEEVQKIQEEHAQEYLTTKFSEGLMEVMSNQLKELSLQLESEK
DIRLEFVNAICHMLSIDLFIRDEVNVLKRSLLKLLGVKEFSSESMFKRSQNIFKVPDMIC
SFCSSCCDLELGKPTTENIFKCKHCSNDFDKSLIEGRLIDYVQNKMVGYQLQDLQCSRCS
QINANNVLERCHCSGKWISAQVENKSEKVADTIHLIHSISQQHNFDTLNEIISYMLKKKK
NT seq 6483 nt   +upstreamnt  +downstreamnt
atgtacacaaacaaatccaacaataaacctcggctgctaaacaagcccacaaagaagaaa
ggagaccatggcagtcaacaagaaagattggatgacgatgaaaaagctcaacaattaaaa
gaatatagagaaaagaaaaaactagaggaaattgaaattgacaaacgattctttggacca
cagatggagggtacaaagaatctgggttggttggtaaactttagagcaacgagtgtacca
gaaaaattgactatgggtgggtccggaggtgaagatgatgccaattcttcggatatggat
cttgctgcagttgtgttatattttatgagtgatgaaggtgactctttttctgtcaccaaa
gtattcgaaccatatttctatattgctgtgaaggatgacaattcatttacagaagtttgc
aattatttaacatcaatggacccaatagtatcattggatatagtagataaagaagatctt
gacaaggttaatcacctttccggtataaaggcaaagtacttgaaattgagatttaaaaac
gttcaacaattgatggaaatgagatctaagttattaccaataattgaaaaaaataagaaa
aagagtcaagattcgtttgagctattagaagaagagttattgaacgaagaaatggaggat
cagttcttagatgatcttgatgactacgaaagaggaattagacgtaaaaggaaagctaaa
ctttcgactattgattgtgttgacaagatagttgatattagagaatatgatattaaatat
catattcgttgtgccattgatacagatttaagagttggttattggtatgatatttctgtt
gaggaaggaaatgttttgatttcaaagagagaagatatcgaagaaagagctgttcctaaa
gtttgtgctttcgatattgaaaccacaaaacctcctctcatgttccctgatccacaatca
gatagaattatgatgatatcttatatgattgacggccacggttacttaattgtgaatcgt
gaaatcgtcgctgaagatatcgaaaattttgattatactccaaaagatgaattccctgga
tattttgaagttttcaacgtagaaaatgaaaaagagttattacttaaatggttttcacat
atgcaagaagaaaaaccatgtgtatatgtgacgtataacggtgactttttcgattggcct
ttcatagaacaaagagctagtgtatattcactgaatcttagagaccatgtaggttactat
agaatgtcaggagattgcaaaaagcttggatctgacacgctttatggcagtagttttggt
ctccatatcgattgtctgtattgggttatcagagacagttatttacctcaaggttctcat
ggtttgaaagctgtcactaaagccaagttaaagtatgatcctattgaagtagatcctgaa
gatatgttaccttttgcaacaagtcaacctcaaaaattggcttcttattctgtttctgat
gcagtttcaacatactatttatatatgaagtatatcaatccttttatcttctcactttgt
aacattattccaatgccaccagatgaagttttgagaaaaggatcaggtacactctgtgaa
acacttctcatggtacaagcattcaagggtaatattattttcccaaatagatatcaatca
gatcctgaaaagatgtataagggtcacttgttagcaagtgaaacatatatcggtggtcgt
gtagaaggtttaaagtctggtgtttatagatcagatataccatacaaattcaaattaaat
ccagacagatatcaacaattagttgataatgtagatagagtcattagatttgcaattgaa
gttgaacaacaattgaaagttgaagatgttgccaactttgaggaattgaaacaagaaatt
attgatggtttacttaaactcaaagaaaaaccagaaagagaagaatgtccaaaattatat
cacttggatgttggtgctatgtatcctaacattattcttacacacagacttcaaccatct
gctattgttaacgaggacacctgtgctcaatgcatttacaataagccagagaatgattgt
aagagaataatgaagtggcactttagagctgaatattttacagcatctagatctgaattt
aatattgccaagaattctttaatgaacgataatccaaactttaccaatgaagaattaaga
aagagagtgggtgaaatcagtcaaaaggcccacaagaagaaatataataaggaaagtatg
gtcaaggatgctactatttgtcaaagagaaaatccattctatgtaaatacagttagagaa
tttcgtgacagaagatatgtacttaaagataaatccaaagaatggaaggacaagtctaaa
gatccagaatttgaagaaaagtccaaagtcatgttagttttgtacgattctcttcaactt
gcccacaagtgtattttgaactctttctacggttacgttatgagaaaagctgccagatgg
tacagtatggaaatggctggtgttgttacttacaatggtgctcaaattattagaatggcc
agagagcttatcgatgatattggtatttcattggaattggatactgatggtatttggtgc
atgctccctggttcattccctgaaaattatacactcaagcttactaatggtaagaagaga
acaatctcctatccttgtttgatgttgaacgcagatgttgctcaaaatttcagtaacgat
caatatcaaaatttcaatccagaaactggaaaatgggacaagagagctgaatgttccatt
ttcttcgaagttgacggtccttatcgtgctatgattttgccagcctcaaaggaagaaggt
aaatctattaagaagagatatgcagttttcaatcatgatggtactttggctgaattgaag
ggtttcgaaattaaaagaagaggtgaacttaagcttattaagattttccaatctcaagtt
ttcgaacaattcttaaaaggatattctctctctgaatgttatcaacatgttgctgaaatt
gcaaatagatggctggatattctttacactaaaggtgaaggaattgaaactaagcaactc
tttgattatattactgaaagttctaacatgagtaagaggttagaagaatatggtaatcaa
aaggcagcaagaattacagcagctaaaagattggttgatctttttggtgaacaaatggtt
agagataagggtttagtttgtagttacattgtggcaaagaaacctgaaaatgctagtgtt
acagaacgtgttattccaacagttgttttccaaaaggaggaatctgtatgcttgtcattc
ttgaagaagtggacaaaggatacatcaatgacagaaatcgatctcaaggaaattgttgat
tgggattattatattgaaagattgggtagtgctattcaaaaaattattactattcctgca
gctttacaagctattgataatccagtacctagagttaagcacccagattggttgctcaaa
aagttgagagaaaatgcaagtcaaagcaaacaaagatccttgatggatatgcttaagaag
atacccgtaacagaagattcttcctctgatagtgatgaagaaatggaagacgcttcaggt
gatgaaaaaccaaaatctaaatctacaaagagaaagattgacgatgttgatgatgattca
ttaggtgaagaggtagggcaaaagagaaagaagaaaaagaagaagaacaagaccaagaaa
tctaaatcctcagatggtaacactcttgtcaatgatggtactatggcttcatatgttcaa
ttttattctaaccaacttaaagacctcgtgtggcatgttattgaagttagagaatccgaa
acaccaggtcttctcaagctttttattagtgttggaggtaaaatgagaacattcaagata
gaagtaccaagagttgtctatctcaatttttatcaaaagcaaggtgaatcagaggagcct
cataagaaattaccaattctctcaagtcagcttgttgaaacttcagtagctaataagaga
gatacattcctctatagaaaagagttgctagagtcgtactaccaaaagaacttgcaaact
atttactctgaattctctaatcctcatattcaaggtgtttatgagacacaaattgatcct
gttcttagagctgttctttcaattggttcactttgtcaagtacatccaaagtcaagagaa
aagattgactctgccaatacgcttactgtttcagatcttgttcaagttgacggaagtcat
tctaagaagaatcctggtgtatcttatctcaaagatgtaacaaacttgcaaaaattatat
ctttttgaaagttgttgtgatgtcagaggtgttattggtttgttctcttttgcaaacaag
aaagcatatatttatttgattcattcaattgatctccaaactacaggtttgcatcctgat
agattattcgatgaagtattagatcaaattattgagcaatctaacttgaatattacagaa
attgaagaatttgaattggatgttttcaagaatagagttgatgtacttaaagaaattaac
aacattttggcgaaggaaagaaaggcatcatctctgcttttagttcagtctccattctca
taccaaactcattcagcctctgaaatcgctccaatgttagaagaaatacctattgtagcc
attcctttcagtgaagaagacaacaaatatcaacatgctctctcagcatactggactaat
aattgtatcaagcaaatgtttatcagatattgtgctattgaaaaatggtataaggatatg
actaactacagtaactattgtggtattcctattggtaatattgaatcaaatgactttgtt
atgcatttaattgacatgatgtttggaagaagtttacaaaatgactatgtattgtggtta
agcaaggccaacaaaccagatttaggaggttgcgaaaatgatgcactacaacaacaagca
ttgttgagtgatgaccaattgtattccagaagtggtacttttattaatcactctgcttgc
tatcactcagtttgtgttgagtttgatatttctcacttggacattaatgccattttgcaa
agtagttttattgaagaaacaattgatgacaagattagtaattcatctaaattctccact
gttactgaaattttcaaaatattcaagcaagttgtttccaaaatgttcgcagatgttcac
aatgatgacaatacctgtcctgatgttccagatttgttgttatcaaatctttatagatgg
tgttgtaatactcatgctaagcttttccatcctgaaattttagcattcatctacagactt
caaaagaaagtcttcctccaactctgtgctcactttaagaagtgtggatgtagaatcatc
tatgccaacttcactaagattattgtagatactggcaagaatactacagatgaagctaag
gtttacactgactaccttaagtcaagcattcaacaacaaaagttattcacttgggttgat
attgaagttaaaaacacttggagtaatttgttgtggtttaatcaagataacttcttgggc
tttaaggaagaccaagaaacagagactggactttcttctgatccacacattgatttattg
agtgaacttccagaatcagttagagtacatttagtattctatctttctacttacatgtat
gaatgtctcaagtatagaagatcattggatgaaaaaatttcaacaatgaaggcagaagaa
gttcaaaagatccaagaagaacatgcccaagaatatttgacaactaaattctcagaaggt
ttgatggaagtgatgagtaatcaactcaaagagctctccctacaattagaatcagaaaaa
gatattagattagagtttgttaatgcaatttgccatatgctttcaattgatctttttatt
agagatgaagttaatgtgctcaagagatctttactgaaattattgggtgtaaaggaattc
tcttccgaatcaatgttcaagagatcccagaatattttcaaggttcctgatatgatttgt
tcattctgtagttcttgttgtgatcttgagcttggtaaaccaacaacagaaaacatcttt
aaatgtaaacactgctcgaatgactttgacaaatctctaattgagggaagattaattgac
tatgttcaaaataagatggttggatatcaattgcaagatttacaatgttctagatgctcc
caaattaatgccaataacgtacttgaacgttgccactgttcaggtaaatggatttctgcc
caagtagaaaataagagtgaaaaggtagcagacacaattcaccttatccattccatttct
caacaacataattttgatacattgaatgaaattatttcatacatgttgaagaagaaaaaa
taa

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