Nocardiopsis gilva: CDO52_02115
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Entry
CDO52_02115 CDS
T05022
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
ngv
Nocardiopsis gilva
Brite
KEGG Orthology (KO) [BR:
ngv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ngv03032
]
CDO52_02115 (gyrB)
03400 DNA repair and recombination proteins [BR:
ngv03400
]
CDO52_02115 (gyrB)
Enzymes [BR:
ngv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CDO52_02115 (gyrB)
DNA replication proteins [BR:
ngv03032
]
Prokaryotic type
DNA Topoisomerases
CDO52_02115 (gyrB)
DNA repair and recombination proteins [BR:
ngv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CDO52_02115 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
ASU81747
UniProt:
A0A223S0X9
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All DBs
Position
406896..408833
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AA seq
645 aa
AA seq
DB search
MAYDASAITVLEGLEAVRKRPGMYIGSTGERGLHHLVYEVVDNSVDEALAGHANAIEVIL
MADGGVRVADNGRGIPVGMHAVEKRPALEVVLTVLHAGGKFGGGGYAVSGGLHGVGLSVV
NALSTRLSAEIWTEGHRWTQDYRDGAPTADLSKDEPTEETGTQITFWADGSIFETTTYNF
ETLARRMQETAFLNKGLSITIRDERPEFTGDAPVVHTYHYENGLADFVRHINAAKDPAHA
SIISFEEEGDGISVEIAMQWNQSYTSSVHTFANTINTAEGGTHEEGFRTALTSIVNRYAR
DQRLVREKEDNLTGDDIREGLTAIISVKLADPQFEGQTKTKLGNTEAKSFVQRVTNEHLR
DWFERNPGEAKDVVTKATQAARARVAARQARDLTRRKTLLESTSLPGKLSDCQSTEPEKS
EVYIVEGDSAGGSAKGGRDPHYQAILPIRGKILNVEKSRIDRILKNNEVQAIITAMGTGV
HEEFDIEKLRYHKIILMADADVDGQHIRTLLLTLLFRFMKPLIEAGYVYLAQPPLYKIKW
DQRGSDADYAYTDRERDELIAAGLAAGKRDPRPRDLVQRFKGLGEMNANELWDTTMDPAG
RVLLQVTLDDAAQADEMFSVLMGEDVESRRSFIQRNARDVRFLDI
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
ttggcctacgacgcttcagcgatcacagttcttgaagggctcgaggcggtacgtaaacgc
cccggcatgtacatcggttccaccggtgagcggggtctgcaccacttggtctacgaagtg
gtcgacaactctgtggacgaggccctcgccggccacgccaacgcgatcgaggtcatactc
atggccgacggcggcgtgcgcgtcgccgacaacggccgcggcatcccggtgggaatgcac
gcggtggagaagcggccagccctcgaggtggtgctgaccgtgctgcacgcgggcgggaag
ttcgggggcggcgggtacgcagtctccggcggtctgcacggtgtgggcctgtcggttgtc
aacgccctgtcgacccggctgtcggcggagatctggaccgaaggtcaccggtggacgcag
gactacagggacggcgctcccaccgccgacctctccaaggacgagccgaccgaggagact
gggacccagatcaccttctgggccgacggctcgatcttcgagacgaccacctacaacttc
gagacgctcgcgcgccggatgcaggagacggccttcctcaacaaagggctgtccatcacc
atccgcgacgagcgcccggagttcaccggcgacgccccggtcgtccacacgtatcactac
gagaacggcctggccgacttcgtgcggcacatcaacgccgcaaaggaccccgcgcacgcc
tcgatcatctccttcgaggaggagggcgacggcatctcggtcgagatcgccatgcagtgg
aaccagtcctacacctcctcggtgcacaccttcgccaacaccatcaacacggccgagggc
ggcacccatgaggagggcttccgcacggcgctcacctcgatcgtcaaccgctacgcccgc
gaccagcggctggtgcgcgagaaggaggacaacctcaccggcgacgacatccgcgagggc
ctcacggcgatcatctcggtgaagctggccgacccgcagttcgagggccagaccaagacc
aagctgggcaacaccgaggccaagtcgttcgtccagcgcgtgaccaacgagcacctgcgc
gactggttcgagcgcaaccccggcgaggccaaggatgtcgtcaccaaggcgacccaggcc
gcgcgcgcccgggtcgccgcccgccaggcccgcgacctgacgcggcgcaagacgctgctg
gagtcgacctcgctgcccggcaagctgtcggactgccagtccaccgagccagagaagtcc
gaggtctacatcgtcgagggcgactccgccggcggctcggccaagggtggccgtgacccg
cactaccaggcgatcctgccaatccgcggcaagatcctcaacgtcgagaagtcgcgcatc
gaccggatcctgaagaacaacgaggtccaggcgatcatcaccgccatgggcaccggggtc
cacgaggagttcgacatcgagaagctgcggtaccacaagatcatcctgatggccgacgcc
gacgtcgacggccagcacatccgtaccctgctgctcaccctcctgttccggttcatgaag
ccgctcatcgaggccggctacgtgtacctggcccagcccccgctgtacaagatcaagtgg
gaccagcgcgggtccgacgccgactacgcctacaccgaccgcgagcgcgacgagctcatc
gccgcggggctggcggccgggaagcgggacccgcgcccgcgcgacctcgtgcagcgtttc
aagggcctgggcgagatgaacgccaacgagctgtgggacaccaccatggacccggcaggg
cgcgtgctgctccaggtcacactcgacgacgcggcgcaggccgacgagatgttcagcgtg
ctcatgggtgaggacgtcgagtcccggcgctccttcattcagcgcaacgcccgcgacgtc
cgcttcctcgacatctga
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