KEGG   Nocardiopsis gilva: CDO52_21415
Entry
CDO52_21415       CDS       T05022                                 
Name
(GenBank) oligoribonuclease
  KO
K13288  oligoribonuclease [EC:3.1.-.-]
Organism
ngv  Nocardiopsis gilva
Brite
KEGG Orthology (KO) [BR:ngv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ngv03019]
    CDO52_21415
   03009 Ribosome biogenesis [BR:ngv03009]
    CDO52_21415
Messenger RNA biogenesis [BR:ngv03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     CDO52_21415
Ribosome biogenesis [BR:ngv03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    CDO52_21415
SSDB
Motif
Pfam: RNase_T Peripla_BP_2
Other DBs
NCBI-ProteinID: ASU85013
UniProt: A0A223SA83
LinkDB
Position
4800514..4801164
AA seq 216 aa
MNDCLVWIDCEMTGLDLERDALIEVACRITDGDLNQLDEGIDVVIKPPQEALDQMGEFVT
QMHTTSGLLDELDKGVTLKEAEDLVLAHIKRYIPEPKKAPLCGNSIATDRLFLARDMPRI
DEYLHYRMVDVSSIKELLRRWFPRIYFASPEKNGGHRALADINESILELRYYRAAGFVPA
PGPDSATARAIAADIAAGGKGVPSTTEEETETHEEK
NT seq 651 nt   +upstreamnt  +downstreamnt
atgaatgactgcctggtgtggatcgactgtgagatgacggggctcgacctcgaacgcgac
gcgctgatcgaggtggcctgccgcatcaccgacggcgacctcaaccagctcgatgagggc
atcgacgtggttatcaagccgccgcaggaggcgcttgaccagatgggcgagttcgtcaca
cagatgcacaccacctccgggctgcttgacgagctggacaagggtgtgaccctgaaggaa
gccgaggacctcgtcctggcgcacatcaagcgctacatcccggagccgaagaaggccccg
ctgtgcggcaactccatcgcgacggaccggctgttcctcgcccgcgacatgccccgcatc
gacgagtacctgcactaccggatggtggacgtctccagcatcaaggagctgctccgccgc
tggttcccccgcatctacttcgccagcccggagaagaacggcggccaccgcgccctggcc
gacatcaacgagagcatcctggaactccgctactaccgcgccgccggcttcgtccccgcc
ccgggtccggacagcgcgacggcccgcgccatcgcggccgacatcgccgccggaggcaag
ggtgtgccgagcaccacggaggaagaaaccgaaacccacgaggaaaagtga

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