Nitrobacter hamburgensis: Nham_0004
Help
Entry
Nham_0004 CDS
T00348
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
nha
Nitrobacter hamburgensis
Brite
KEGG Orthology (KO) [BR:
nha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nha03032
]
Nham_0004
03400 DNA repair and recombination proteins [BR:
nha03400
]
Nham_0004
Enzymes [BR:
nha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Nham_0004
DNA replication proteins [BR:
nha03032
]
Prokaryotic type
DNA Topoisomerases
Nham_0004
DNA repair and recombination proteins [BR:
nha03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Nham_0004
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
GyrB_insert
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
ABE60906
UniProt:
Q1QS91
LinkDB
All DBs
Position
4459..6900
Genome browser
AA seq
813 aa
AA seq
DB search
MNESAGQQLADTEPAAPVEYGAESIRVLKGLDAVRKRPGMYIGDTDDGSGLHHMVYEVVD
NAIDEALAGHATRVEVILNADNSVTVRDDGRGIPVDIHKGEGISAAEVIMTQLHAGGKFD
QNSYKVSGGLHGVGVSVVNALSSKLILRIWRKDKEHLIEFAHGDAVAPLKVVGEANGKRG
TEVTFLASRETFTNVEYDFATLEHRLRELAFLNSGVNILLSDLRRAVEKREQMMYDGGVV
EFVKYLDRNKKAMVPEPIMIRADMNGLGVEAALWWNDSYHENVLCFTNNIPQRDGGTHLA
GFRGALTRQVNGYADAMARKERIALTGDDCREGLTAVLSVKVPDPKFSSQTKDKLVSSEV
RPVVENVINEALAAWFEEHPTEAKLIVGKVVEAAAAREAARKARELTRRKGALDVASLPG
KLADCQERDPAKSELFIVEGDSAGGSAKQGRNREFQAVLPLRGKILNVERARFDKMLSSE
QIGTLITALGTGIGREDFDLSKLRYHKIIVMTDADVDGAHIRTLLLTFFFRQMPTLIEAG
HLYIAQPPLYKVTRGKSEQYLKDERALEDYLIETGLDDCVFKLATGEDRSGRDLQALVED
ARVIRNVLHNMHGRYNRSVIEQAAIAGVLNPRVTADVATANAAADYIARRMDALADEVER
GWIGRFTEGEGFSFERTVRGVKDIAMIDDALLGSADARKLDEYAAKLQEAYPRPGLLRRK
DTETPIHGPVGLFEAVTDAGRKGVALQRYKGLGEMNPDQLWETTLDASERSLLQVKIKEV
DEADDIFTKLMGDVVEPRREFIQENSLSANVDV
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaatccgccgggcagcaacttgccgatacagaacctgccgcgcccgtcgaatac
ggcgcggaatcgatccgggttctcaagggcctcgacgccgtgcgcaagcggcccggcatg
tatatcggggacaccgatgacggatccggcctgcatcacatggtgtatgaagtcgtcgac
aacgccatcgacgaagccctggcgggacacgccacccgcgtcgaggtgatcctcaacgcc
gacaattcggtcacggtgcgcgacgacggccgcggcattcccgtcgacattcacaagggc
gaaggcatctccgcggccgaggtcatcatgacccagctccatgccggcggtaagttcgac
cagaactcctacaaggtctccggcggattgcacggcgtcggcgtctcggtggtgaacgcg
ctgtcgagcaagctgatcctgcgcatctggcgcaaggacaaggagcacctgatcgaattc
gcccatggcgacgccgtggcgccgttgaaagtcgtcggcgaggccaacggcaagcgcggc
accgaagtcacttttcttgcctcgagggagaccttcaccaacgtcgaatacgatttcgcc
acgctggagcatcgcctgcgcgaactcgcgtttctgaactccggcgtcaacatcctgctc
tcggacctgcgtcgtgccgtcgagaagcgcgagcagatgatgtacgacggcggcgtcgtc
gaattcgtcaaatacctcgaccgcaacaagaaggcgatggtgccggagccgatcatgatc
cgcgccgacatgaacggcctcggtgtcgaggcggcgctgtggtggaacgacagctatcat
gaaaacgtgctctgcttcaccaacaacattccgcagcgcgacggcggcacccatctcgcc
ggtttccgcggcgcgctgacgcggcaggtcaacggctatgccgacgccatggccaggaag
gagaggatcgcgctgaccggcgacgattgccgcgagggcctgaccgcggtgctttcggtg
aaagtaccggacccgaaattctcgtcgcagaccaaggacaagctggtgtcctcggaagtg
cggccggtggtcgagaatgtcatcaacgaagccttggctgcgtggttcgaggaacatccg
accgaggcgaagctcattgtcggcaaggtggtcgaggcggcggcggcccgcgaggccgcg
cgcaaggcgcgcgaactgacgcggcgcaagggcgcgctcgacgtcgcttcgcttcccggc
aagctcgccgactgccaggaacgcgacccggcgaagtcggagttgttcatcgtcgagggc
gactcggccggaggcagcgccaagcagggccgcaaccgcgaattccaggccgtcttgcca
ctccgtggcaagatcctgaacgtcgagcgcgcgcgcttcgacaagatgctgtcgtccgag
cagatcggcacgctgatcaccgcgctcggcaccggcatcggtcgcgaggatttcgacctg
tcgaagctgcgctatcacaagatcatcgtgatgaccgacgccgacgtcgacggcgcgcat
atccgcacgctgctgctgacgttcttcttccggcagatgccgacgctgatcgaggccggc
catctctatatcgcccagccgccgctctacaaggtgacccgcggcaagtccgagcagtat
ctgaaggacgagcgcgcgctggaagactatctgatcgagaccgggctcgacgactgcgtg
ttcaagctcgccaccggcgaagaccgcagcggccgcgacctgcaggcactggtggaagac
gcccgcgtcatccgcaatgtgctgcacaacatgcacggccggtacaaccgcagcgtcatc
gaacaggcggcgattgccggtgtgctgaacccgcgggtgacggcggacgtcgcgaccgcc
aacgccgcggccgattacatcgccaggcggatggatgcgctggccgacgaagtcgagcgt
ggctggatcggacgtttcacagagggcgagggtttttctttcgagcgcaccgtgcgcggc
gtcaaggacattgccatgatcgacgacgcgctgctcggctcggccgatgcgcgcaagctc
gacgaatacgctgcgaagctacaggaagcctatccgcggccgggcctcttgcgccgcaag
gataccgaaaccccgatccacggcccggtcggcctgttcgaggcggtaaccgacgccggc
cgcaagggcgtggcgctgcaacgctacaaaggtctcggcgagatgaacccggaccagctc
tgggaaaccacgctcgatgccagcgagcgttcgctgctgcaggtgaagatcaaggaggtc
gacgaggccgacgacatcttcaccaagctgatgggcgacgtggtcgagccgcgccgcgag
ttcatccaggaaaactcgctcagcgccaacgtggacgtgtga
DBGET
integrated database retrieval system
