KEGG   Nectria haematococca: NECHADRAFT_37641Help
Entry
NECHADRAFT_37641  CDS       T01612                                 

Definition
(RefSeq) hypothetical protein
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
nhe  Nectria haematococca
Pathway
nhe03030  DNA replication
nhe03410  Base excision repair
nhe03420  Nucleotide excision repair
nhe03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:nhe00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    NECHADRAFT_37641
   03410 Base excision repair
    NECHADRAFT_37641
   03420 Nucleotide excision repair
    NECHADRAFT_37641
   03430 Mismatch repair
    NECHADRAFT_37641
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:nhe03032]
    NECHADRAFT_37641
   03400 DNA repair and recombination proteins [BR:nhe03400]
    NECHADRAFT_37641
Enzymes [BR:nhe01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     NECHADRAFT_37641
    6.5.1.6  DNA ligase (ATP or NAD+)
     NECHADRAFT_37641
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     NECHADRAFT_37641
DNA replication proteins [BR:nhe03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    NECHADRAFT_37641
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     NECHADRAFT_37641
DNA repair and recombination proteins [BR:nhe03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     NECHADRAFT_37641
   NER (nucleotide excision repair)
    Other NER factors
     NECHADRAFT_37641
   MMR (mismatch excision repair)
    Other MMR factors
     NECHADRAFT_37641
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C
Motif
Other DBs
NCBI-GeneID: 9673136
NCBI-ProteinID: XP_003051530
JGI: 37641
UniProt: C7YPB7
LinkDB All DBs
Position
4
AA seq 878 aa AA seqDB search
MPSPTKKRKLNNGTQSAAPTRGLEYFFSKQRQHGSASNKTPETETKNETTRDAPENLTDE
ELARKLQAEWDQEVANERQANQTGTRSTPSEQNESKSRDESPAASELKPPKALPTMPKPS
ASGDPKKPTLGLQSAGMAEDTISTSIPLDESPLTFEPSKYIPQLKEHWASEGGNASYALL
TRCFVLISGTTSRIKIVDTLVNCLRVLIEGDPTSLLPAVWLATNSISPPYISLELGLGGS
AISKALRNVCGLDSKSLKAIYDKHGDAGDVAFEAKRKQSFTLRKPKPLTIKAVYQSLVKI
ANSQGQGSGEAKQRLVDRLLQDARGGEESRFIVRTLCQHLRIGAVKTTMLIALSRAFLLS
RPPEADFPIRSASELSKLKKEELAEIWGRGEELVKACFARRPNYDDLVPVLLEIGISEEL
LIRCGIALHIPLRPMLGSITRDLAEMLTKLQGRDFACEYKYDGQRAQIHCDEHGKSTIFS
RHLELMTDKYPDLVELMPKIRGEGVDSFIMEGEVVAVDQATGELKNFQTLTNRARKDVAI
GSITIDVCLFSFDLMYLNGQPLLDRPFRERRELLRSLFKEVPHHFTWVKSLDATSADSES
VLDFFKSATENKCEGIMVKILDNLPALPYVGDAEEQEPEKAEKPAPKAKAKGKAKSKNTP
GENGGETKTKSRRKPLLATYEPDKRLDSWLKVKKDYSSSFDTLDLIPVAAWHGQGRKSKW
WSPILMACRNEETGALEAVCKCMSGFTDAFYKANREFYDDGEESEEPKNTRSQQPSFVEY
SGPRPDVWFEPQEVWEMAFADITLSPTYTAAIGLVSEERGLSLRFPRFLKKREDKSLEEA
STNDVLAGLFRKQEAKASSTKENKNGGEEVEEADEVEE
NT seq 2637 nt NT seq  +upstreamnt  +downstreamnt
atgccgagtccgaccaagaagcgcaaactgaacaatggcactcagtcagctgcgcctaca
cgagggctggaatacttcttttccaagcaaagacagcatggttctgcttccaataaaacc
ccagagaccgagactaaaaatgagacaacgagagatgccccggagaatctcacagacgag
gaactggccagaaaactccaagctgaatgggatcaagaagttgcgaatgaacgacaggct
aaccagaccggaactcgttcaacgccaagcgaacagaatgaatcaaaatccagagacgaa
agtcctgctgcttcagagttgaagccaccaaaagcacttccgacaatgcccaaacccagc
gcatccggagacccgaagaaacctacactcggtctacagtctgctggcatggctgaagat
acaatttcaacatcaatacccctagacgagtcccctctaacttttgagccatccaagtat
atcccccagctcaaagaacattgggcatcagaaggcggcaacgcctcctacgccctcctt
actcgctgcttcgtcttgattagcggaacaacaagccgcataaagatcgtggacacgctg
gtcaactgtttaagagtgttgatagaaggggatccgacaagcctattaccagcggtctgg
ttggcgactaattcaatatcgcctccatacatttccctagagctgggcctgggcggatcc
gccatatcgaaagcgttgcgaaacgtttgcggacttgacagcaaatctctaaaagccatc
tacgacaaacacggcgacgccggagacgtggctttcgaagcaaagaggaaacagagtttc
actctaaggaagccaaagcctttaacaatcaaggctgtgtatcagtctctggtcaagatc
gccaatagtcaaggacaagggagcggagaagcaaagcaaagactggtggatcgactactc
caggatgcccgtggcggagaggagagccgattcattgtgcgaactctgtgtcagcatttg
cgtatcggggcagtcaaaacaacaatgctcatcgccctctcgagggcttttttgctttca
cgcccaccggaagcagatttccccatcagatcagcatctgagttgtccaaactaaaaaag
gaggaattggctgagatctggggccgaggcgaagagctcgtcaaggcttgcttcgctagg
cgtcctaactacgatgacctggttccagttctcctcgagattggcatctcagaagagcta
ttgattcgctgtggcattgctctacacatcccactcagacctatgttgggaagcatcacc
cgggatctggccgagatgcttacaaaactacagggaagagactttgcttgtgagtacaag
tatgatggacagcgtgctcagatccactgcgacgaacatggaaaatccacaattttctct
cggcatcttgaactaatgacagacaagtaccccgacttggttgagttgatgccaaagatc
cgcggtgagggcgtcgatagcttcattatggagggcgaagtggtggctgtcgatcaagcg
accggggagctcaagaatttccagacgctcaccaaccgagccaggaaggatgtcgccatt
gggagcatcactattgatgtctgcctgttttcgtttgacctgatgtatttgaacggccaa
cctttgctggaccgcccattccgagaaagacgggagcttctgcggtcactcttcaaagag
gttcctcaccactttacttgggtaaagagccttgatgctacgtcagcagactcggaatct
gtcttggatttcttcaaatctgcaacggagaacaagtgtgagggaataatggtcaagatt
ttggataacctgcctgcactgccatatgttggagatgctgaggagcaggagcccgaaaaa
gccgagaagccggcaccaaaagccaaagcgaagggcaaggccaaatcaaagaacactcct
ggtgagaacggaggggaaacaaagaccaaatctcgtcgaaagccgttgctggcgacatac
gaaccagacaagcgacttgattcgtggctcaaggtcaagaaggactacagttccagtttt
gatactctggacctcatccccgttgctgcttggcatggacagggtcgtaaatcgaagtgg
tggtcgcctattctcatggcttgccgcaatgaggagactggggccttggaagccgtatgc
aagtgcatgtctggtttcacggatgccttttacaaggccaacagggagttctatgatgac
ggagaggagagcgaggagcccaagaacacaagatcacaacagccgagttttgtggagtac
tcaggcccaagaccagatgtttggtttgagcctcaggaggtatgggaaatggcgtttgca
gatattacgctcagtccgacttatacggcagcgattggtctagtcagtgaggagagaggg
ctgagtctgcggtttccgaggttcttgaagaagagagaggacaaaagtctggaggaggcg
agcacaaacgatgtcttggctggactgtttcggaagcaagaggcaaaggcgtcgtcaacg
aaagagaataagaacggaggcgaggaagtggaagaggcagacgaggttgaggagtga

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