Fusarium vanettenii: NECHADRAFT_38713
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Entry
NECHADRAFT_38713 CDS
T01612
Symbol
CPC2104
Name
(RefSeq) condensin complex component SMC3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
nhe
Fusarium vanettenii
Pathway
nhe04111
Cell cycle - yeast
nhe04113
Meiosis - yeast
Brite
KEGG Orthology (KO) [BR:
nhe00001
]
09140 Cellular Processes
09143 Cell growth and death
04111 Cell cycle - yeast
NECHADRAFT_38713 (CPC2104)
04113 Meiosis - yeast
NECHADRAFT_38713 (CPC2104)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nhe03036
]
NECHADRAFT_38713 (CPC2104)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
nhe00535
]
NECHADRAFT_38713 (CPC2104)
Chromosome and associated proteins [BR:
nhe03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
NECHADRAFT_38713 (CPC2104)
Meiosis-specific proteins
Cohesin complex and associated proteins
NECHADRAFT_38713 (CPC2104)
Proteoglycans [BR:
nhe00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
NECHADRAFT_38713 (CPC2104)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
SbcC_Walker_B
AAA_29
ABC_tran
Motif
Other DBs
NCBI-GeneID:
9672787
NCBI-ProteinID:
XP_003052257
JGI:
38713
UniProt:
C7YQW0
LinkDB
All DBs
Position
4
AA seq
1197 aa
AA seq
DB search
MYIKQIIIQGFKSYKDQTVIEPFSSKTNVIVGRNGSGKSNFFAAIRFVLSDAYTQMSREE
RQGLLHEGSGSAVMSAYVEIIFDNSDDRFPTGNKEVVLRRTIGLKKDEYSVDRKVVTKSD
VMNLLEAAGFSRSNPYYIVPQGRVTALTNMKESDRLNLLKEVAGTQVYETRRAESLKIMN
ETNNKREKIDELLKYIKERLDELEEEKEELKAYQNKDREKRCLEYAYYYSEQTKIQNSLE
ELDNARQDGLDNTDIRRDEFTEGEKAIEKLDAEVHKLQRDMEMLQIDRRQLEEDRRDNAK
ALAKAEMKTKNLREGQSAQEQARAQHDAELESVQADIAAKEEELATIIPDYNRRKEEEAE
VRRQLDHVEATRNRLFAKQSRGSRFRNKSERDAWLRQEIEELNRTISTQKANKIDADEEV
ERVQQSISQTEQEVSDLRTRLANFNSERQAISDEATKAHDVLEKLNDERKLVRREDDKLN
KLIGDARQEKESSERELSNTMDGATARGLATIRRLKQENDIPGAYGTLAELLEVSDAYRL
PVEQIAGASLFHYVVDNADTATHLADALFRQRGGRVTFMPLAQLRPRQINLPRSNDAVPL
LSKISYNPEYEKAFQQVFGKVVVCPNLTVAGQYARSHGVDGITAEGDTTNKRGAMTGGYI
DPRKSRLQAVQSVNKWRDNYEEKIAESRDIRRQVELKDQEITAAMSELQKLEQKLRQADD
SFGPLRHELRNKSVHLENERNHLEAAIKRREGVEKNMNVFLEDVAGHEAELQTDFKKSLT
AAEERQLEELSDSVQELQKQWNEASNARRSLETRKQLLEGDLRQNLQLKLDQLNSQAFEN
SASGLSSGGLKEAQRELKKAQKALKAVEASLQETQAKMDDIQNRLDQLAVEKAQREQRQQ
EISGKIEKHKKRMDKSLRQKALWTARAAELAKTIRDLGVLPEEAFDKYENMEEKTVSIIV
NEALKKYKHVNKKAFEQYNSFTTQQDQLMKRRKELDASQTSIEELVEHLDRRKDEAIERT
FKQVSKEFSTIFGKLVPAGHGRLLIQRRTDRRQEPADDSEGETRGAVENYIGVGISVSFN
SKHLDEQQKIQQLSGGQKSLCALCLIFALQATESSPMVIFDEVDANLDAQYRTAVAALLD
SISNEIGTQFICTTFRPEIVHVADKCYGVTFVNKTSTIDCVTADDALKFVEGQARPN
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
atgtatatcaagcagatcattatccagggcttcaagagctacaaggaccagaccgtcatt
gaacccttctcgtcaaagacaaatgtcatcgtcggtcgcaatggctccgggaagagtaac
ttctttgccgccatccgcttcgtcctcagcgatgcctacacacagatgagtcgcgaggag
cgccagggtctccttcacgagggctctggctccgctgtcatgtcagcatacgtcgagatc
atctttgacaatagcgacgaccgtttcccgactggcaacaaggaggttgttctgcgccgc
acgattggtcttaaaaaggacgaatattccgtcgaccgcaaggttgtgaccaaatcggac
gtcatgaacctcctcgaagctgcaggattctcgcgatcaaacccatactacatcgtgccc
caaggacgagtcactgccctgaccaacatgaaggagtcggacagactgaacctgctgaag
gaggtagcgggaacacaagtgtacgagacccgtcgtgccgagtcgctcaaaatcatgaac
gagaccaacaacaagcgagaaaagatcgacgagcttctcaagtacatcaaagaacgactg
gatgagctggaggaggaaaaggaagagctcaaggcctatcagaacaaggaccgagagaag
cgatgcctggaatacgcatactactacagcgagcagactaaaatccagaactctctggag
gaactcgacaacgcccggcaagacggccttgacaacactgacataagacgagacgagttc
acggagggcgaaaaggcgatcgagaagcttgatgcggaagtacacaaactccagcgtgac
atggagatgttgcagattgatcgacgacaacttgaggaagataggcgcgacaatgcaaag
gcgctggccaaggcagaaatgaaaaccaagaacctcagggaaggacaatctgcccaagag
caagcgcgagcacagcatgatgcagaactggaatcagtccaagctgacatagccgccaaa
gaggaagagttggcgacaatcatccccgactataacagacggaaagaagaggaggccgag
gtacgaaggcaactcgatcatgtggaggccacgagaaaccgtctttttgccaagcaaagc
cgaggctctcgattcagaaacaagagcgagcgtgatgcctggctaaggcaagagatcgag
gagttgaatcgcaccatcagcacccagaaggccaacaagattgatgcggacgaggaggtt
gagagggttcagcagtccatctcccagaccgagcaagaggtttctgatcttcgaactcgc
ctggccaatttcaacagtgaaagacaagccatctcagatgaggcaaccaaggcacacgac
gttctcgagaaactgaatgacgaacggaagctcgttagacgagaggacgacaaactcaac
aaactcattggtgatgctcggcaagagaaggagtcatcggagcgtgagctgtcgaatact
atggacggagctactgcgcgtggtctggcaactatccgacggctgaagcaagagaatgac
atccctggagcatacggaacactggcagaactcctcgaagtcagcgacgcctatagactt
cccgtggagcaaattgctggcgccagtctctttcactatgttgtggacaatgcagacacc
gccactcatctcgcagatgctctcttcagacaacgaggaggcagagtaacctttatgcct
cttgctcaactgcgaccacgacaaatcaacttaccgagatccaacgacgctgtaccgctc
ttgtccaagatctcgtacaaccccgagtacgagaaggctttccagcaagtgtttggcaag
gttgttgtctgcccaaacctgactgttgccggccagtatgccagaagccatggcgttgat
ggtatcactgccgaaggtgacaccacaaacaagagaggtgccatgactggtggatatatc
gatccacgaaagtcacgactgcaagcggtccagtctgtcaacaaatggcgagacaactac
gaggagaagattgccgagtctcgcgatatccgccgacaggttgagctcaaagaccaagag
atcacagctgccatgtcagaacttcaaaagctggagcagaagctgcggcaggccgatgac
agcttcgggcccctgaggcatgagctgaggaacaagtcggtgcatctagagaacgaacga
aaccaccttgaagctgctatcaagcgtcgggagggtgtggagaagaacatgaatgttttc
ctggaagatgttgcaggtcacgaggctgagcttcagaccgacttcaagaagagcttgaca
gcagccgaggaacgccagctggaggaactcagcgacagtgtccaggaactccagaagcag
tggaacgaggccagcaatgctcgccgtagtctggaaacacggaagcagctcctcgaggga
gatttgcgccagaacctgcagctgaagcttgaccagctcaacagtcaagcttttgagaat
tcagcatctggactatcgtcaggtggtctgaaggaggcgcagagggagctcaagaaggct
cagaaggctctgaaagctgtcgaggccagccttcaggagacacaggccaagatggatgac
atacagaaccgtctagaccagttggccgtcgagaaggcgcagcgagagcagaggcagcaa
gaaatctcggggaagatcgagaagcacaagaagagaatggacaagagtctacgtcagaag
gctctctggacggcgcgggctgctgaactcgccaagaccattcgggacctcggtgtgctc
cccgaggaagcatttgataaatacgaaaacatggaggagaagacggtgagtatcattgta
aacgaggcgctcaagaagtacaagcacgtcaacaagaaggcctttgaacagtacaacagc
ttcaccactcagcaagatcagctgatgaagcgacgaaaggagctggacgcttcccaaacg
tctattgaggagctcgttgagcaccttgaccgtcgaaaggatgaagccattgagcgtacc
ttcaagcaagtttcgaaagaattctcgaccatctttggtaagctggtgcccgctggtcat
ggtcggctgctcatccagcgacggacggatcgtcgccaggagccggccgatgactcggag
ggagagacacggggtgctgtcgagaactacattggtgtaggaatcagcgtctcgttcaac
tcgaagcatctggacgagcagcaaaagatccagcagctgagtggtggccagaagagtttg
tgtgctctctgcctcatctttgccctccaggcaaccgagagcagtcccatggttatcttt
gacgaggtggacgccaacctggacgcccagtatcgtacggctgttgcagcgctcctcgac
tccatctccaacgagattggtacgcagttcatctgcaccaccttccgacccgagatcgtc
cacgttgcagacaagtgttacggtgtgacgtttgtcaacaagacgagcaccatcgactgc
gtcactgcggatgacgccctcaagtttgtcgagggtcaggcgagaccgaactga
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