KEGG   Nectria haematococca: NECHADRAFT_95596Help
Entry
NECHADRAFT_95596  CDS       T01612                                 

Definition
(RefSeq) hypothetical protein
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
nhe  Nectria haematococca
Pathway
nhe03030  DNA replication
nhe03410  Base excision repair
nhe03420  Nucleotide excision repair
nhe03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:nhe00001]
 Genetic Information Processing
  Replication and repair
   03030 DNA replication
    NECHADRAFT_95596
   03410 Base excision repair
    NECHADRAFT_95596
   03420 Nucleotide excision repair
    NECHADRAFT_95596
   03430 Mismatch repair
    NECHADRAFT_95596
Enzymes [BR:nhe01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     NECHADRAFT_95596
    6.5.1.6  DNA ligase (ATP or NAD+)
     NECHADRAFT_95596
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     NECHADRAFT_95596
DNA replication proteins [BR:nhe03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    NECHADRAFT_95596
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     NECHADRAFT_95596
DNA repair and recombination proteins [BR:nhe03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     NECHADRAFT_95596
   NER (nucleotide excision repair)
    Other NER factors
     NECHADRAFT_95596
   MMR (mismatch exicision repair)
    Other MMR factors
     NECHADRAFT_95596
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase MctB
Motif
Other DBs
NCBI-GeneID: 9665645
NCBI-ProteinID: XP_003048798
JGI: 95596
UniProt: C7YYZ1
LinkDB All DBs
Position
8
AA seq 856 aa AA seqDB search
MAPKQATLGKFFGAKGAAPVRQTTLSFSTKAKKEEAEEGEADVSTNGSKADKADKKAEAE
SAPIKKEEAEEDSDGPVTKRARRSRKRVEEEDDDISDEPVKKKTPSPKKRKSASPSPKPT
PTKKSKARAVKEPAAEEEDEPVKDEASTASASEAEDDAEVEEEKPEVAAKARQKAQTKLK
TKTKEKDPYPDWEAGTPVPYAALCTTFSLIEMTTKRLIIMEHCSLFLRQVMRLTPNDLLP
TVLLMINKLAPDYAGIELGIGESLIMKAIGETTGRSLQVIKADQKEIGDLGLVAVKSRST
QRTMFKPKALTIRGVHQGLMNIATVTGNGAQGRKVDGIKKLLAAADANSTGKVDITKDKG
GPSEAKFIIRFLEGKLRLGLAEKTVLVSLAQAIVCHEADAKDKVPSTSDIEKGESILKTV
YSELPSYDVIIPAILEHGIMKLRENCNLRPGVPLKPMLAKPTKAITEVLDRFEGQTFTCE
YKYDGERAQIHYVAKDAPQQLSQASQGAAKEVGAGVASIFSRNSEDLSKKYPDILAKLST
WVKPDTKSFVLDCETVAWDVDEKKVLPFQQLMTRKKKDVKVEDVKVKVCVFAFDLLYLNG
EAVVERALRERRELLEAAFIPVEGEFAFATHMNGQELEEIQVFLDESVKASCEGLMVKML
DGRESGYEPSKRSRNWLKIKKDYLSGVGDSLDLVVLGAYYGKGKRTSVYGAFLLACYNPN
SDTYETVCNIGTGFSEQVLEDLHKQLSEITIDRPKPFYSHSSGGQHQPDVWFEPRYVWEV
KTADLTLSPRYKAGAKEGVDPSGTKGISLRFPRFIRIRDDKNADSATTSRQVAEMYRKQE
SVSKSKGPAVDDDFEY
NT seq 2571 nt NT seq  +upstreamnt  +downstreamnt
atggcacccaagcaggcgacactcggcaagttttttggtgccaagggggcggcaccggtg
cgacagacaaccctttcattcagcaccaaggccaaaaaggaggaggcagaagagggggag
gctgatgtgagcacgaacggctcaaaagctgataaagccgacaaaaaagccgaagccgaa
tctgcgcccattaagaaggaggaggctgaggaagatagcgatggccccgtcaccaagcgt
gcgagacggtctcgaaagagggttgaggaggaggatgacgacataagcgacgaaccagtc
aagaagaagactccatctcccaagaagcgcaaatcggcgagcccctcacccaagcctaca
cctaccaagaaatccaaagcccgagctgtcaaggaacctgccgctgaggaggaggatgag
cccgtcaaggatgaagcatctacagcatcggcttcagaggcagaagatgacgcagaggtg
gaggaggagaagcctgaagttgctgccaaagctcggcagaaggctcagacaaagctcaag
accaagaccaaggaaaaggatccctaccccgattgggaggcgggaacaccggttccatat
gcggctctctgcaccacattttctcttatcgagatgactaccaagcgcctgatcattatg
gagcattgctccttgttcctccgacaagtcatgcgcttgacacccaatgatctgcttccg
acggtattgcttatgatcaacaagctagctcccgactatgctggcattgagcttggtatt
ggagaatctctcatcatgaaggccattggcgagaccacaggccggagtctccaggtgatc
aaggccgaccagaaggagattggtgacctgggtctggtagctgtgaagagtcgatcaact
cagcgtaccatgttcaagcctaaggctcttacgatcaggggagtccatcagggcctaatg
aatattgctacagtcaccggaaacggtgcccagggccgcaaggtggatggtatcaagaaa
ttgctcgcggcggctgatgccaactcaaccggcaaggttgatatcaccaaggacaagggc
ggaccaagcgaggccaagttcatcattcgattcctggaaggaaagctgagacttggtctg
gccgagaagacggtccttgtttcgctcgcccaggccattgtctgccacgaagcagatgca
aaggacaaggttcccagcacctcggatatagagaagggcgagtctatcctcaagacggtt
tacagtgaactcccaagctacgacgtcattattcctgctatcctcgagcacggaattatg
aagcttcgcgagaactgcaatcttcgacctggtgttcctctgaagcccatgttagccaag
cccaccaaggctatcactgaggtgctggaccgatttgaaggacagacgtttacttgtgaa
tacaagtatgatggcgaaagagcgcagattcactatgtggccaaggatgcaccccagcag
ctgagccaggcaagccagggagcagccaaggaggtcggtgctggagttgcaagcatcttt
tcgagaaactctgaggatctctccaagaagtatcccgatattcttgctaagcttagtact
tgggtgaagcctgataccaagagtttcgtcttggattgcgaaactgttgcctgggatgtg
gacgagaagaaggtgttgcccttccagcaactcatgacacgcaagaagaaggacgtcaag
gttgaggatgtcaaggtcaaggtgtgtgtctttgcctttgacctgctttatctcaacgga
gaagctgtggttgaaagggcactacgggaacgacgtgagctactcgaggctgcatttatc
cctgttgaaggcgaattcgccttcgctacccacatgaacggccaggagcttgaagagatc
caggtcttccttgacgaaagtgtcaaggcttcatgtgaaggtctcatggtcaagatgttg
gatggtagggagagtggatatgagcccagcaagcgaagtcgcaactggctcaagatcaag
aaggattacctctctggtgttggcgactctctcgaccttgtcgtcctgggggcatactac
ggcaaaggcaagcgtacttcagtgtacggagcattcctcctggcatgctataacccgaac
tcagacacatacgagaccgtatgtaatattggaactggtttttcggagcaagtgcttgaa
gatctacacaagcaactgtccgagatcaccattgaccgacccaagcccttctactcgcac
tcatctggtgggcaacaccagcctgacgtctggtttgagccccgttacgtctgggaggtc
aagactgcggatctgacgctcagcccacgatacaaggccggtgccaaggagggagtagac
ccttcaggcaccaagggtatcagtctgcgattcccacgtttcattcgcatccgtgatgac
aagaatgccgattctgccacgacgagtcgtcaggttgctgagatgtaccgcaagcaggag
agtgtgtccaagagcaaggggcctgctgtggatgacgactttgaatattag

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