Nitrosococcus halophilus: Nhal_3426
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Entry
Nhal_3426 CDS
T01198
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
nhl
Nitrosococcus halophilus
Brite
KEGG Orthology (KO) [BR:
nhl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nhl03019
]
Nhal_3426
03009 Ribosome biogenesis [BR:
nhl03009
]
Nhal_3426
Messenger RNA biogenesis [BR:
nhl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Nhal_3426
Ribosome biogenesis [BR:
nhl03009
]
Eukaryotic type
Pre-60S particles
RNases
Nhal_3426
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
ADE16455
UniProt:
D5C1A3
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All DBs
Position
3530199..3530750
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AA seq
183 aa
AA seq
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MAQAPPNLIWLDLEMSGLDTTQDVILEIATVVTDSDLNIIEEGPVFAIHQNDAILDNMDE
WNTRQHTKSGLVERVRHSLIDEATAEQRTLEFLGQHTHANSSPLCGNSICQDRRFLARYM
PQLEAYLHYRNLDVSSIKELAKRWAPEVAKGFKKESAHLALADIRESIEELAYYRAHFFR
LPG
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atggctcaggccccccccaacttaatctggttagatctagaaatgagcggtcttgatacg
actcaggatgtcattctcgagatcgctaccgtagtcacggatagtgacctcaatattatc
gaggaaggcccggtgttcgccatccatcaaaacgacgccatcctcgacaatatggacgaa
tggaatactcgacagcatactaaatccggtttagttgaacgagtacgccacagccttata
gacgaggcaacagcggaacaacggaccctggaatttctcggtcaacacacccatgcgaat
agctctcctctgtgcggcaacagcatttgtcaggaccgacgttttctcgcccgttacatg
cctcagctagaggcctaccttcactaccgtaacctggatgtcagttccattaaggaactg
gctaaacgttgggcaccagaagttgccaaaggtttcaagaaggaaagcgctcatctcgcc
ttagccgatatccgggaatccatcgaggaattggcttactatcgagcccatttctttcgc
ttgcccggttaa
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