KEGG   Neorickettsia helminthoeca: NHE_0088Help
Entry
NHE_0088          CDS       T03076                                 

Gene name
gatB
Definition
(GenBank) aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit
  KO
K02434  aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
Organism
nhm  Neorickettsia helminthoeca
Pathway
nhm00970  Aminoacyl-tRNA biosynthesis
nhm01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:nhm00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    NHE_0088 (gatB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03029 Mitochondrial biogenesis [BR:nhm03029]
    NHE_0088 (gatB)
Enzymes [BR:nhm01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.5  Carbon-nitrogen ligases with glutamine as amido-N-donor
    6.3.5.6  asparaginyl-tRNA synthase (glutamine-hydrolysing)
     NHE_0088 (gatB)
    6.3.5.7  glutaminyl-tRNA synthase (glutamine-hydrolysing)
     NHE_0088 (gatB)
Mitochondrial biogenesis [BR:nhm03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    NHE_0088 (gatB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: GatB_N GatB_Yqey
Motif
Other DBs
NCBI-ProteinID: AHX11059
UniProt: X5HJ30
LinkDB All DBs
Position
78673..80127
Genome map
AA seq 484 aa AA seqDB search
MYYIEGNTSKWEVVIGLEVHAQILSKNKLFSDAPCDHRKEPNTSVTLFDAAMPGVLPVLN
FNCIEKAVKAGLGLQGKINLYSVFERKHYFYPDLPHGYQITQNTYPLITGGCVRIKNPEK
VIRIHHIHIEQDAGKSIHDLSPDKTYIDLNRAGVPLMEIVSEPDIRSPAEAVAYVNKLKL
ILQCVGASNANMEKGELRCDVNVSVRKLGEEKMGNRCEIKNLNSTKSLAQAIEYEARRQV
EILESGGSIEVETKLFDVNNLNTRAIRSKESVMDYRYFPDPDLLPLVLEEEYIEKIKSFL
PELPDAREERYVNDLKLPTYDAEVIVSNVRASHYFDCLLEMGHAAKLAARWLTVELFGLL
NKNNISFEDNKITPEILGELLTLVVDEEISERTAKEVLAKSLDGVSSPKEIVKRDGLQQI
TDQNIILGHVETVLNENPDKLQEYLSGRDKILGFFVGQIIKRSNGNASPHVVNKILMQEI
AKRR
NT seq 1455 nt NT seq  +upstreamnt  +downstreamnt
atgtactatatagaaggaaatacatctaagtgggaagttgtcattggattagaggtgcat
gcccaaattctttctaagaataaacttttctccgatgctccgtgtgaccaccgtaaagag
cctaatacatcagttacactcttcgacgcggcaatgcctggtgtacttcctgtactgaac
ttcaattgtatcgagaaagcagtaaaagctggccttgggttgcaggggaagatcaatttg
tactcagtgttcgaaagaaaacactacttctatccggatctcccacatggataccagatc
acacagaatacctatccacttattacaggtggttgtgtgaggataaaaaatcctgaaaaa
gtcattagaatacatcatatacatatcgaacaagatgctggaaaaagtattcatgatctc
tcaccggataagacttacatagatcttaatagagccggcgtccccttaatggaaatagtt
tcagagcctgatataagatctcctgctgaagcagttgcgtatgtgaataaattgaaactc
atcctacagtgtgttggtgcctctaatgcgaacatggaaaaaggcgaattgcgctgtgat
gtaaatgtctcggtccgcaaattgggcgaggaaaaaatgggaaatagatgcgagatcaaa
aatctcaattcgacaaagagtctcgcccaggccatagaatatgaggcacgaagacaagtc
gagattctagaaagtggtggctcaattgaagtagaaacaaaattgtttgatgtcaacaac
ttgaacacaagagcaatacgctccaaggagtccgtgatggattataggtattttccagac
cctgatctgctaccgctagtcctggaagaggaatatatcgagaaaattaagagcttcctg
ccagagttacctgatgcaagagaagaaaggtatgtgaatgatctgaagttgccaacatac
gatgctgaggtgattgtttcgaatgtacgggcttcgcattatttcgattgcttattggag
atgggtcacgctgcgaagcttgctgctagatggttgactgttgagctgtttggcctgttg
aacaagaataatattagttttgaagacaataagatcacgcctgaaatattaggagaactc
cttacacttgtagtagatgaagagatttccgagcgtacagcaaaagaggttttagcgaaa
agtttggatggcgtaagttcaccaaaggaaattgtcaaacgtgatggtctacaacagatt
acagatcaaaatattattcttggtcatgtagagactgtactgaatgaaaatccggataaa
ttgcaggaatatctctctggtagggataaaattcttggattttttgttggtcagataatc
aagagaagtaatgggaatgccagtccacacgtagtcaataagatacttatgcaggaaatc
gcaaagcgtcggtag

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