Nitrosomonas sp. Is79A3: Nit79A3_1078
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Entry
Nit79A3_1078 CDS
T01569
Name
(GenBank) UvrD/REP helicase
Organism
nii
Nitrosomonas sp. Is79A3
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Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
Viral_helicase1
AAA_22
AAA_30
DEAD
Dna2
Motif
Other DBs
NCBI-ProteinID:
AEJ00938
UniProt:
F8GDQ7
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Position
1178237..1181713
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AA seq
1158 aa
AA seq
DB search
MDDGTPIPDADERYRALDPAQSFIVQAPAGSGKTALLIQRYLRLLTCVDAPEEIVAITFT
RKAAAEMRVRVLAALEVEKKLTDAETAYEKLNRELSAAVLQRDRQAGWHIAENPERLRIQ
TIDSLCASLTRQMPMLSKFGAQPETVEDATNLYLEAARATLQLIEQNNVIAQDVKRLLEH
LDNDMARIETLLAEMLSRRDHWLRHIHGRTREELETSLQNSRRNALRYVSRVFPKAMQNE
LLDLLRYAASNLLSSEGKSSGISFCDRLEALSAADVEHWCGIAELLLTKEGAWRKRISVN
EGFPTGNTKTEKDKAKAWKNRLEILIESLNPEDTFRRALHDMRQLPPSCYSDKQWEILGA
IIRLLPYAVAQLSIIFQASGYVDFSEVAQRALIAFGDSESPTDLALALDYRIKHLMIDEF
QDTSISQFKLIEKLVAGWEAEDGRSLFAVGDPMQSIYRFREAEVGLFLQARNSGIGHLVL
QPLTLRANFRSQQGIIDWINTAFAQIMPGCEDVATGAVAYSASIATHSRLTGNAVQLYPF
FEKNHVAEAEQVVEIITRTQRDNPTGTIAILVRNRSHLREIVGQLKKAGLQFRAIDIELL
YHKSVVQDLLALTRALINPADRLAWFAVLRAPWCGLLLMDIAALASIKKNENAHGVIAKE
MTVWELMCDENHWHSISTDAMMRIRRIREILEPCMNHRQRQSLRMTVEALWQALGGPGCI
NPVEKNGNYMANNLDDAMIYLDYLEEQEEAGAIQDLANFEKGLNALYASPDLDADDTLQI
MTIHKAKGLEFDTVIVPGLGRAPRNNDKRLLKWIEQPQNEVIDVSGVSIPDLLLAPIQET
GAEADSIYLWMEKLDRNKEQLETDRLLYVAATRAKSFLHLLGHAGLASDSDGKTMLKKPV
IGTLLNRLWLIVQSVYIDAIEKNTASGNCQLDGKDSEMHMDGIDNQEIYRLRAGWILPDA
PKSVTWQEPHASIQIQEEIEFSWASEMARHVGNVVHRWLQKIAEDEMHDWSTVRIQMLQD
QFKQNLCASGMSGNNNEVSYAVERITLALTYAITDKNGQWILGPQQSAQNELRITGIVDN
VPMTWVIDRTFCDSSGVRWIIDYKTSSHEGSDINDFLDREQMRYQHQLNHYAKIMRQIDS
RPIRLGIYFPLIGGWREW
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atggatgacggtacgcccattcctgatgcagatgagcgctatcgcgcattggatcctgcg
caatcatttatcgtgcaggcaccggcaggatcgggaaagactgcgcttctgattcagcga
tatctccgattgttgacctgtgttgatgcgccggaagaaattgtggcgattacgtttacc
aggaaagccgcagcagaaatgcgtgtacgtgttttggcagcactcgaagttgaaaagaaa
cttaccgatgcggaaacggcttatgaaaaattgaaccgtgagctgtcggctgctgtttta
cagcgagatcgtcaggctggatggcatatcgccgagaatccggagcggttgcggatacaa
acgattgattcattatgcgcttcattgacacggcaaatgccaatgctgtcgaaattcggc
gcacaacccgaaacagtcgaggatgctacaaatctctatcttgaagcggcgcgtgctacg
ttgcagctgattgaacaaaacaatgtgatcgcccaggatgtgaagcggttgcttgaacat
ctggataacgacatggcgcgcattgagacattgcttgccgagatgttatcgcgacgcgat
cattggttgcgccatattcatggcagaacccgagaggagctggaaacttcgctgcaaaat
tcacgccgcaatgcattgcgctatgtttcccgggtatttccaaaggcaatgcaaaatgaa
ttgctggatttgctgcggtatgccgcttcgaatcttctttcttcagaaggcaaatcatcg
gggattagtttctgtgatcggctagaagcattatcggcggcggatgttgagcactggtgt
ggtattgctgaattattgctgaccaaagagggcgcatggagaaaaagaatttctgtcaac
gaaggatttccaaccggtaacaccaagactgaaaaagacaaggcgaaagcgtggaagaat
cgactagaaattctgattgagtcacttaatccggaggatacgttccggcgagcactgcac
gatatgcgccaacttccaccgtcttgttattccgataaacaatgggaaatattgggagca
ataataagattgctgccatatgccgttgcacaacttagtatcatttttcaagccagcggt
tatgtggatttctcagaagtggcgcagcgtgcattgattgcgttcggtgattctgagtca
ccgacagatctggcattagcgttggattatcgcattaagcatttgatgattgatgaattc
caggatacttcaatcagtcagtttaagttgatcgagaaacttgttgccggctgggaagct
gaggacgggcgtagcctatttgcagtgggtgatccaatgcaatccatttaccggtttcgt
gaagcagaagtgggactttttttacaagcacgaaattcagggattggtcatctggtttta
cagccgctcacgctcagagctaatttccgttcacagcaaggtattattgattggattaat
actgcttttgcacaaatcatgcccggttgcgaggatgtcgcaacaggtgcagtggcttat
agcgcttcgattgcgacacattctcggcttactggcaatgcggtgcagctatatccattt
tttgaaaaaaatcatgttgcagaggccgaacaagttgtggaaattatcacgcgaacgcaa
cgtgataacccaactggaacgatagcaatattagtgcgtaaccgtagtcatttacgcgaa
attgtagggcaattaaaaaaagccgggttgcagtttcgcgcgattgacatcgaattgttg
tatcacaagtctgtggtacaggatttgctagcgctcacgcgtgcactcataaatccggcc
gatcgtcttgcctggtttgcagtgttacgagccccctggtgtggtcttttgctcatggat
attgccgcgttagcgagtattaaaaagaatgaaaatgctcacggtgtgatcgccaaagaa
atgactgtgtgggagttgatgtgcgatgaaaatcattggcatagcatttcgaccgatgca
atgatgcgcatacgccggatacgggagatattggaaccttgtatgaatcatcggcagcgc
caatcattacgcatgacggtagaagcactttggcaagcgcttggcggtccgggttgcata
aatccagttgaaaaaaatgggaattacatggcaaacaatctggatgatgccatgatttat
ttggattatcttgaggagcaagaagaagctggtgctattcaagatttggcgaactttgaa
aaggggctaaatgcgctgtatgcctcaccagatctggatgctgatgacaccttgcagatc
atgacgatacataaagccaagggacttgaatttgatacggtgatcgtacccggactcggt
cgagcgccgcgtaataatgataagcggttgctgaaatggatcgaacaaccacaaaacgaa
gttatagatgtaagcggtgtgtcgattccagatttattacttgcgccgattcaggaaaca
ggggcagaagctgattcaatctacttatggatggagaaactggatcgaaacaaggagcaa
ctcgaaaccgatcgtttgctttatgttgctgcaacgcgtgcaaaaagttttttacattta
ttgggccatgccggtttggcttccgatagtgatggaaaaacaatgcttaagaagccagtc
attggcacattactaaacaggctatggttaattgtgcaatcagtttatattgatgcaata
gaaaaaaataccgcatctgggaattgtcaactggatggcaaagatagtgagatgcacatg
gacggtatagataatcaagaaatctatcgattgagggcaggatggattttaccggatgct
ccaaaatcagtaacttggcaagaaccgcatgccagtatacaaatacaagaagaaatagaa
ttttcttgggcgagcgaaatggctcgtcatgtgggtaatgtagtgcatcgatggttacaa
aaaattgctgaagatgaaatgcatgactggagtactgtacgcatacaaatgttgcaagat
cagtttaaacaaaatttgtgcgctagtggaatgagcgggaataataatgaggtgagctac
gcagttgaacgcattactctggcgttgacatatgcaatcaccgataaaaacgggcaatgg
atcctgggaccgcagcagtctgcacaaaatgaattaaggatcactggtatcgttgataat
gtgccaatgacttgggtgatcgacagaactttctgtgattccagtggagtgcgatggatt
atagattataaaacaagcagccatgagggttcagatataaatgatttcctagatcgcgaa
cagatgcgttaccagcatcagctcaatcattatgcaaaaattatgcggcagatagactca
cgccctataagattagggatttattttccattaataggtggttggcgagagtggtaa
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