Nitrincola iocasae: F5I99_02995
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Entry
F5I99_02995 CDS
T06212
Symbol
rpoE
Name
(GenBank) RNA polymerase sigma factor RpoE
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
nik
Nitrincola iocasae
Brite
KEGG Orthology (KO) [BR:
nik00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nik03021
]
F5I99_02995 (rpoE)
Transcription machinery [BR:
nik03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
F5I99_02995 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_23
HTH_16
Kinetochor_Ybp2
HTH_38
Motif
Other DBs
NCBI-ProteinID:
QEW05536
UniProt:
A0A5J6LAZ8
LinkDB
All DBs
Position
641448..642038
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AA seq
196 aa
AA seq
DB search
MSKDSQVSADQLLVERVQAGDKTAFDLLVKKYQHKIIGLISRYIYDHHEAMDVAQEAFIK
AYRALPNFRGDSAFYTWLYRIAINTAKNYLVARGRRPPDTDIDADDAQYFEADSDLRQIE
NPENALYRDELQRVINQVLDRLPEDLRVALTLREFEGLSYEEIAKVMDCPVGTVRSRIFR
AREAIDNEIAPLLSTD
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
gtgtctaaagatagccaggtaagtgctgatcagctgttggtggagcgggttcaggcaggt
gacaaaacagcgtttgatttgctggttaaaaaataccagcacaaaattattggactcatc
tcgcgttatatatacgaccaccatgaagcgatggatgtggcacaggaagcctttattaag
gcgtatcgcgccttgcccaattttcgtggcgatagcgcgttttatacttggttgtatcga
attgccattaatacggcaaagaattatctggttgcaagagggcgacgtccgccagatacg
gatattgatgctgatgacgcgcagtactttgaagctgactcagatttaagacagatcgaa
aatcctgaaaacgccttgtatagagatgaattacagcgtgtgatcaaccaggttttggat
cgattacccgaagaccttagagtggcattaacactacgagagttcgaagggttgagttat
gaagaaatagctaaggtgatggactgccctgtcggtacggtgagatctcgtatcttcaga
gccagagaggccatagacaacgagatagcaccgctgctcagtacagactga
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