Nitrincola iocasae: F5I99_04315
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Entry
F5I99_04315 CDS
T06212
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
nik
Nitrincola iocasae
Pathway
nik00470
D-Amino acid metabolism
nik00550
Peptidoglycan biosynthesis
nik01100
Metabolic pathways
nik01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
nik00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
F5I99_04315
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
F5I99_04315
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
F5I99_04315
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
nik01011
]
F5I99_04315
Enzymes [BR:
nik01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
F5I99_04315
Peptidoglycan biosynthesis and degradation proteins [BR:
nik01011
]
Precursor biosynthesis
Amino acid ligase
F5I99_04315
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp_4
ATP-grasp
ATP-grasp_3
RimK
ATPgrasp_ST
Motif
Other DBs
NCBI-ProteinID:
QEW05773
UniProt:
A0A5J6LB71
LinkDB
All DBs
Position
909187..910146
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AA seq
319 aa
AA seq
DB search
MKAFEITAVEKQTFGRVAVLMGGDSAERSISLRSGAEVLKGLCQAGVDAFAIDLCANGAD
PVAQLLDAEFDRAFLILHGRGGEDGTLQGLLEMLKKPYTGSGVAASALGMDKLRCKQLWL
GAGFPTPPFAELNADADLQAVADKLGFPMMVKPVHEGSSIGMSRVKDLAQLQAAYAEAAR
YDNLVIAEQWVQGAEYTLAVLRDTALPVIKLETSHDFYDFNAKYEASDTRYLFEHGLSDA
QHQALQTLAVKAFSAVGCRGWGRVDVMMNADGEFLLLEVNTLPGMTDHSLVPMAAKQAGM
SFSELVVEILRTAKLDRES
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcatttgaaataaccgccgttgagaaacagacttttgggcgagttgctgtgctg
atgggcggagattccgctgaacgcagtatctcactgcgtagtggcgccgaagtattgaaa
ggtttatgtcaggctggcgtcgatgcttttgctatcgatctgtgtgccaacggggctgat
ccggttgcacaattacttgacgccgagtttgatcgtgcctttttgattctgcatggccgg
ggcggcgaagatggcaccttgcagggcttgctggaaatgctgaagaagccttataccggt
agtggtgtggccgcctcagcgctaggaatggataagctacgttgcaagcagttatggctg
ggagccggttttccaacgccaccctttgctgaactgaacgcagacgctgacttgcaggcg
gtggccgacaaactgggctttccgatgatggtcaagcctgtgcatgaaggctccagtatt
ggtatgagccgtgttaaggatttggcacagctgcaggcagcttatgctgaagcagcccgc
tatgacaatctggtgattgctgaacagtgggtgcagggagccgaatataccctggctgtc
ttacgtgatacggccctgcctgtcatcaagttagagacctcgcacgacttttacgatttt
aatgccaaatacgaagcatccgatacccgttatttgtttgaacatggactttcagatgcg
cagcaccaggcactgcagacattggctgtaaaagctttcagtgctgttgggtgtcgtggc
tggggtcgggttgatgtgatgatgaatgccgatggtgaatttctgttgctggaagtgaac
actctgccgggcatgacagaccatagtctggtgcctatggcagcgaaacaggcgggcatg
agtttctccgaattagtggtagaaattctacgcacggcaaaactggaccgggagagctaa
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