Nitrincola iocasae: F5I99_18340
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Entry
F5I99_18340 CDS
T06212
Name
(GenBank) RraA family protein
KO
K10218
4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:
4.1.3.17
]
Organism
nik
Nitrincola iocasae
Pathway
nik00362
Benzoate degradation
nik00660
C5-Branched dibasic acid metabolism
nik01100
Metabolic pathways
nik01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
nik00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00660 C5-Branched dibasic acid metabolism
F5I99_18340
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
F5I99_18340
Enzymes [BR:
nik01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.17 4-hydroxy-4-methyl-2-oxoglutarate aldolase
F5I99_18340
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Motif
Pfam:
RraA-like
Nuc_recep-AF1
Motif
Other DBs
NCBI-ProteinID:
QEW08292
UniProt:
A0A5J6LJ10
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Position
complement(3972512..3973162)
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AA seq
216 aa
AA seq
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MINKTNFTDLVSQLSQFGSASIYEAQGARGALDSGMKPLCSSMQVFGSAFTVDIRPGDNL
MLHYALLHVQPGDVLVVDAKRFVEAGPWGDILTEQAIKKGVAGLVINGAVRDVQTIKALG
FPVFCQGISIKGTAKKQLGKINVPICIGDTLINPGDFIFGDADGVVVVPRQDIATVLQET
QLREKTEENYREIIKGGGSTVDLLGLQDTLKRLQLM
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgataaataaaaccaactttaccgatctcgtttcacaactcagccagttcggtagcgct
tccatctatgaagcacaaggcgcccgtggcgctttagatagtggcatgaagccactgtgt
agcagtatgcaggtgtttgggtcggcatttacagtcgatattcgtcctggtgacaatctt
atgttgcactatgccttactgcatgtgcagcctggagatgtgctggtggtggacgccaag
cgtttcgtcgaagctggcccctggggcgatatcctaaccgagcaagccatcaagaaaggt
gtggccggtcttgtgattaacggtgcggttagggatgtccagactattaaagcactcggc
tttccggtgttttgtcagggtattagcatcaaaggcactgccaagaagcagcttggaaag
atcaacgtgccaatttgcattggtgatacgctgattaatccgggtgactttatttttgga
gatgccgatggcgttgtggttgtccctcggcaagatatcgccacggtgcttcaagaaacg
caattgcgtgaaaaaacagaagaaaactatcgggaaataataaagggtggtggtagcact
gtcgacttgctcggtttacaagacacactaaagcgattacagctgatgtaa
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