Candidatus Nitrospira inopinata: NITINOP_2479
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Entry
NITINOP_2479 CDS
T04169
Symbol
hemD
Name
(GenBank) Porphyrin biosynthesis protein HemD
KO
K13542
uroporphyrinogen III methyltransferase / synthase [EC:
2.1.1.107
4.2.1.75
]
Organism
nio
Candidatus Nitrospira inopinata
Pathway
nio00860
Porphyrin metabolism
nio01100
Metabolic pathways
nio01110
Biosynthesis of secondary metabolites
nio01120
Microbial metabolism in diverse environments
nio01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
nio00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
NITINOP_2479 (hemD)
Enzymes [BR:
nio01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.107 uroporphyrinogen-III C-methyltransferase
NITINOP_2479 (hemD)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.75 uroporphyrinogen-III synthase
NITINOP_2479 (hemD)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEM4
TP_methylase
Radical_SAM
Motif
Other DBs
NCBI-ProteinID:
CUQ67451
UniProt:
A0A0S4KY78
LinkDB
All DBs
Position
1:2424509..2426089
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AA seq
526 aa
AA seq
DB search
MKAERAKGKVYLVGAGPGDPKLLTIRGLECLKRADVVLYDYLANSELLKHASNETERIYV
GRRGRGKYPDQDEITRLLIERARQGKVVVRLKGGDPFVFGRGGEEAEALASAGVDFEIVP
GVTAAIAAPAYAGIPVTHRTMASTVTFVTGHEDPEKPSRGVEWPRLATSRGTLVFLMGVK
NLASIAANLVAEGRSPDTPAAVIRWGTRASQQTIVGTLANIAAKAEAAKLEPPAVIVVGE
VVLLRSQLNWFETKPLFGKRVLMTRAQEQAWELAELLAAHGAEPIEAPTIRITPPAEWGA
VDRAIAEIGSYDWIIFTSVNGVNRFMTRLRASGLDARCLAGRVICCIGPRTAQEIEKFGV
KADVLPTDYQAEGIIGALDGLNARSMRVLIPRAEVAREVLPDELRARGAHVDVVSVYRTV
IPNGDGEPWRRLLAEGQVHVVTFTSSSTVRNFVTMVGGEEQAIALLRSVVVAVIGPITAR
TLEEFGMTASIMPDENTIPALVDAIVRYYESRANVAARTSETIQRP
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgaaagccgaaagagcaaagggcaaggtatatttggtcggcgccggaccgggcgacccc
aagctgttgaccattcgcggcttggagtgcctcaaacgagcggacgtggtgctctacgat
tatctggcgaattcggaacttctgaaacacgcgtcgaatgagacggagcggatctatgtc
ggccggcgggggcgaggaaagtatcctgatcaagatgagatcacccgattgttgatcgag
cgggcgcggcaaggaaaagttgtcgtgcgactcaaaggcggagatccgttcgtgtttgga
cggggaggcgaagaagcggaggctctggcgtcggccggcgtcgattttgaaattgttccc
ggcgtcacggccgcgatcgcggctccggcctatgccgggattcccgtcactcacagaacc
atggcttcgacggtgacgtttgtgaccggacacgaagatccggagaagccatcaagggga
gtggaatggcctcggctcgcaaccagccgtggcacgctcgtgtttctgatgggcgtcaag
aatctcgcgtcgattgcagccaatttggtggccgaaggacgatcgcccgacacgccggcg
gcggtgattcggtggggaaccagagcctcacaacagacaatcgtcgggacgttggccaac
attgccgccaaggcggaggcggcgaaacttgagccgccggcggtgatcgtcgtaggggaa
gtggtgcttctccggtcacagctcaattggttcgagaccaagccgctctttgggaagcgt
gtgttgatgacaagggctcaagagcaggcctgggaactggccgagctgctggccgcgcat
ggcgccgagccgatcgaagctcccacaatccggatcacgccgccggccgagtggggggcg
gtcgatcgggccatcgccgagatcggttcctatgactggatcatcttcaccagcgtcaac
ggcgtgaatcgattcatgaccagattgcgtgcgagcggattggacgcgcgttgtctggcc
ggccgggtgatttgttgtatcgggccccgcacggctcaagagatcgagaagttcggagtc
aaggcggacgtccttccgaccgattaccaggcggaaggcatcatcggcgccctggatggg
ttgaatgcccgatcgatgcgcgtccttatcccacgagcggaagtggcgcgtgaagtgctc
ccggacgaattgcgggcccgaggggctcatgtcgatgtcgtatcagtgtataggacggtg
ataccgaacggagacggtgaaccctggcggcgactgttggctgaggggcaggtccatgtg
gtcacgtttaccagctcatccacggtccgcaatttcgtgacaatggtgggaggagaggag
caggctatcgccctcttgcgatcggtcgtcgtggccgtgataggaccgattacggcgagg
accctggaggagttcggcatgacggcctcgatcatgcccgatgaaaatacgattccggcg
ttggtcgatgccatcgtgcggtattatgagagccgggcgaacgttgcggcaagaacgtcg
gagacgatacagcgaccataa
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