Candidatus Nitrosopumilus sediminis: NSED_08350 Help Entry NSED_08350        CDS       T02303                                  Name (GenBank) TATA-box binding family protein   KO K03120   transcription initiation factor TFIID TATA-box-binding protein Organism nir  Candidatus Nitrosopumilus sediminis Pathway nir03022   Basal transcription factors Brite KEGG Orthology (KO) [BR:nir00001]  09120 Genetic Information Processing   09121 Transcription    03022 Basal transcription factors     NSED_08350  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:nir03000]     NSED_08350    03021 Transcription machinery [BR:nir03021]     NSED_08350 Transcription factors [BR:nir03000]  Eukaryotic type   beta-Scaffold factors with minor groove contacts    TATA-binding proteins     NSED_08350 Transcription machinery [BR:nir03021]  Eukaryotic type   RNA polymerase II system    Basal transcription factors     TFIID      NSED_08350   RNA polymerase III system     TFIIIB      NSED_08350   RNA polymerase I system     SL1/TIF-1B      NSED_08350 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TBP Motif Other DBs NCBI-ProteinID:  AFS83462 UniProt:  K0BEK5 LinkDB All DBs Position 1397694..1398257 Genome browser AA seq 187 aa AA seqDB search MPQTKPIVSVENVVASASVDQKIDLIEITEKFPDTEYHPEQFPGLVFRLTNPRTATLIFR TGKMVCTGAKSEEMAIKAVNTVVQKLRKGKIKIKKDAVITVQNIVAAINLGGKIHLEKAA RTLPRSMYEPEQFPGLIHRMLDPKTVILLFASGKLVCTGAKKESDVYRSVHNLHALLEEK TLMIYDQ NT seq 564 nt NT seq  +upstreamnt  +downstreamnt atgcctcaaacaaagccaattgttagtgtagaaaatgttgttgcatcagcatcagtagat caaaaaatagatttaatcgaaattaccgaaaaatttccagatacagaatatcatccagaa caatttccaggtcttgtatttagattgactaatccacgaactgccacactcatctttaga acaggaaagatggtatgtactggagctaaatctgaagagatggcaattaaagctgttaat acagttgttcaaaaattaagaaaaggtaaaatcaaaattaaaaaagatgcggtcattaca gttcaaaatatcgttgcagcaattaatttaggtggaaaaattcatttggaaaaagctgct agaaccctacctagaagtatgtatgaacctgaacaatttccaggattgattcatagaatg ctagatccaaaaacagtgatattgttatttgcatcagggaaattagtgtgtacaggagca aaaaaagaatcagatgtttatcgttctgttcataacttacatgcattattagaagaaaaa accctaatgatttatgatcaatga

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