Nitratiruptor sp. SB155-2: NIS_0003
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Entry
NIS_0003 CDS
T00565
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
nis
Nitratiruptor sp. SB155-2
Brite
KEGG Orthology (KO) [BR:
nis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nis03032
]
NIS_0003 (gyrB)
03400 DNA repair and recombination proteins [BR:
nis03400
]
NIS_0003 (gyrB)
Enzymes [BR:
nis01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
NIS_0003 (gyrB)
DNA replication proteins [BR:
nis03032
]
Prokaryotic type
DNA Topoisomerases
NIS_0003 (gyrB)
DNA repair and recombination proteins [BR:
nis03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NIS_0003 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
TcdA_TcdB
Motif
Other DBs
NCBI-ProteinID:
BAF69121
UniProt:
A6Q0W2
LinkDB
All DBs
Position
2775..5099
Genome browser
AA seq
774 aa
AA seq
DB search
MEKQQYGAEKIKVLKGLEAVRKRPGMYIGDTSVKGLHHLIYEVVDNAIDEAMAGYCNKID
ITLTKDGSARISDNGRGIPVDIHPTEKIPAATVVLTVLHAGGKFGGDSAYKVSGGLHGVG
VSVVNALSKKLIMTIKRDGKIWRQEFERGIPITDLVAIGETRQTGTTIEFWPDEEIFETT
EFKFDILSRRFKELAYLNPNITITFKDERVNTKEVYHFEGGLRQFVEDLNTKEALTKTIY
FHDKVDDVEVDIALLYNSGFDEKVFSFVNNIRTPEGGTHESGFRAGLTRAISNYIAQNAN
AKEKNVKITGEDVREGLVAVISVKVPEPQFEGQTKGKLGSSYVRPITQKLTYEKLTKYFE
ENPLDAKAIMNKALAAARGREAAKKARELVRRKDSMSVGTLPGKLADCQSKDPSISELFL
VEGDSAGGSAKQGRDRVFQAILPLKGKILNVEKARLDKILKSEEIKNIITALGCGIGEEF
DEEKLRYHKIIIMTDADVDGSHIQTLLLTFFFRFLYPVVEKGYLYMAQPPLYRYKKGKKE
VYLKDDTELNQFLIENGVDTLLSEVNIGRYDLIDFLKLVAHYRMVLKDLEKRYSLIEVVR
YLIENRDLAALDNSELYQKIGTFLEQKNYNILNKHIDDEKIHLYVQTEEGLEEIIIDDEL
FTNPYFVEGVYIFEKIEDRVPEELKEKDLMEILEKVEKNAKKGAYIQRYKGLGEMNPEQL
WETTMDPENRRLLRVTVENAEHASDVFSLFMGDEVEPRKKYIEEHAKDVKHLDV
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaacagcaatatggtgctgaaaagattaaagtattaaaaggtcttgaagcagtt
cgaaaacgacctggaatgtatattggagatacgagtgtcaagggactccaccatctcatt
tacgaagtggtagataatgccattgatgaagcgatggcaggatattgtaataaaatcgac
atcactttgaccaaagatggaagtgctcgtatcagcgacaatggacgaggaatcccggtt
gatatccatcctacagaaaagattcctgcagctacggttgttttgacagttttgcatgct
ggaggaaaatttggaggcgacagcgcgtataaagtaagcggcggtttgcatggcgtgggt
gtcagtgttgtcaacgccctatcgaaaaaacttatcatgacaatcaaacgagatggaaaa
atatggcggcaagagtttgaaagagggattccaattaccgatctggttgctatcggtgag
acaagacaaacagggacaaccatcgagttttggccagatgaggagatttttgaaacaact
gagttcaaatttgacattctttccagacgatttaaagagcttgcctatctcaatccaaat
atcactatcactttcaaagatgaaagagtcaatacaaaagaggtataccattttgaaggc
ggtttgaggcagtttgtcgaagatctcaatacaaaagaggcactgacaaaaactatctat
tttcacgacaaagtggatgatgtagaggtggatatcgctctattgtacaatagtggattt
gacgaaaaagttttcagttttgtcaacaacatccgaactcccgaaggtggaacccatgag
agtggttttcgagcgggtcttaccagagccatttccaattatatcgcgcaaaacgccaat
gcaaaagagaaaaatgtcaaaattaccggtgaggatgtacgagagggtctggtagccgtc
atttcagtcaaagttcctgaaccacagtttgaaggtcagacaaaaggaaaactcggctct
tcctatgtacggcctattacacaaaaactcacctatgaaaaactcaccaaatattttgag
gaaaatcctctcgatgccaaagcgatcatgaacaaagcgttagcggctgcaagaggtaga
gaagccgccaaaaaagccagagaactggtccgtagaaaagatagtatgagcgtggggaca
ctgccaggaaaacttgcagattgtcaaagtaaagacccttccatcagtgaactttttttg
gttgagggtgacagtgcgggaggaagtgcaaaacaggggcgggatcgcgttttccaagcg
attttgcctttgaagggaaagattttaaatgtggaaaaggctcggcttgataagatatta
aaatctgaagagatcaaaaatatcatcacagctcttggatgtggaatcggtgaagagttt
gatgaggagaaactgagataccacaaaatcatcattatgaccgatgccgatgtggatggt
agccatatccaaacactgcttcttacctttttctttcgctttttgtatcccgttgttgaa
aagggatatctctacatggcccaaccgcctttgtatcgatataaaaagggtaaaaaagag
gtctatctcaaggatgatacggaactcaatcaatttttgatcgaaaacggcgtcgatacc
ttactcagtgaagtaaacatcggacgatacgatcttatagactttttaaagttggtagcc
cactacagaatggtgctcaaagatttagagaagcgctattccttgatcgaagtggtccgt
tatttgattgaaaatcgagatcttgcagcattggataatagcgaactttatcaaaaaatt
ggaacgtttttagaacagaaaaactataacatactcaataagcatattgacgatgaaaaa
attcatctgtatgtgcaaacggaagagggtcttgaagagattatcatagatgatgaactc
tttaccaacccttactttgtagagggtgtctatatttttgaaaaaatcgaagatagagtt
cctgaagagttgaaagagaaagatttgatggaaattttggagaaagtggagaaaaatgcc
aaaaagggagcttacatccagcgctataaaggtcttggagagatgaatcctgaacagctg
tgggaaaccacgatggatcctgaaaatagaagactccttcgtgtaacagtggaaaatgca
gagcatgctagtgatgtttttagtctctttatgggtgatgaggtagagccgagaaagaaa
tatatcgaagagcacgcaaaagacgtgaagcatctggatgtataa
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