Nitrospira japonica: NSJP_1682
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Entry
NSJP_1682 CDS
T05001
Name
(GenBank) Farnesyl diphosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
nja
Nitrospira japonica
Pathway
nja00900
Terpenoid backbone biosynthesis
nja01100
Metabolic pathways
nja01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
nja00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
NSJP_1682
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
nja01006
]
NSJP_1682
Enzymes [BR:
nja01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
NSJP_1682
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
NSJP_1682
2.5.1.29 geranylgeranyl diphosphate synthase
NSJP_1682
Prenyltransferases [BR:
nja01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
NSJP_1682
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
UbiA
Motif
Other DBs
NCBI-ProteinID:
SLM47854
UniProt:
A0A1W1I4C6
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All DBs
Position
I:complement(1606173..1607063)
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AA seq
296 aa
AA seq
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MNIKDYLEHKQVEVDRFLDQVTPAATLPPTTLHESMRYSLMAGGKRIRPILAIAAAEAVE
TNPPGLMAVACSLEFIHTYSLIHDDLPSMDNDDFRRGKPTNHKVYGDAMAILAGDALLTM
AFDLCSRPDLMKGCDPTRQVRLIQELAYGSGHAGMVGGQVFDIQAENRDIDLAALQNIHK
HKTGMLIRAAVRMGAIAAGATDRQLNDMTGYAEDIGLAFQVADDVLNVTGTREELGKNPN
TDAERGKKTYPTFYGVDGAKKFADECVARAIGRLSSFGQSADPLREIARYITSRKN
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcaaggattatctcgaacacaaacaggtcgaagtcgatcggtttctcgatcag
gttacgccggccgcgacgctgcccccgaccacgcttcacgaaagcatgcgctacagcctc
atggcgggtggaaaacggatccgcccgatcctggcgatcgcggcggctgaggcggtggaa
accaacccgcccggcttgatggcggtcgcctgctccctggaattcatccatacctattcg
ctgatccacgacgatctgccgtcgatggacaacgacgactttcgccgcggcaagccgacc
aaccacaaagtgtacggcgatgccatggcgatcctggccggcgatgcgctgctcacgatg
gccttcgatctctgcagccggcccgatctgatgaagggctgcgatccgaccagacaagtc
cgtttgattcaggagctagcctatggctccggtcacgccggcatggtcgggggacaggta
ttcgacattcaggcggaaaaccgggacatcgacttggccgcgctccagaacatccataaa
cacaaaaccggcatgctgatccgcgccgcggtacgaatgggcgcgatcgcggccggagcc
accgaccgccaactcaacgacatgacgggctacgctgaggacatcggactggcctttcaa
gtcgccgacgacgtgctgaacgtcaccggcacccgggaagagctgggcaagaatccgaac
acggacgccgagcgcggcaagaagacctatccgaccttttatggagtcgacggcgcaaag
aagttcgccgacgaatgcgtggcccgggcgatcggccgcctgtcctccttcggccaatcc
gccgatccgcttcgcgagatcgcccgatacatcacgtccagaaagaactga
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