KEGG   Nitrospira japonica: NSJP_1736Help
Entry
NSJP_1736         CDS       T05001                                 

Gene name
ddlB
Definition
(GenBank) D-alanine:D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
nja  Nitrospira japonica
Pathway
nja00473  D-Alanine metabolism
nja00550  Peptidoglycan biosynthesis
nja01100  Metabolic pathways
nja01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:nja00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00473 D-Alanine metabolism
    NSJP_1736 (ddlB)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    NSJP_1736 (ddlB)
 09160 Human Diseases
  09168 Drug resistance
   01502 Vancomycin resistance
    NSJP_1736 (ddlB)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:nja01011]
    NSJP_1736 (ddlB)
Enzymes [BR:nja01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     NSJP_1736 (ddlB)
Peptidoglycan biosynthesis and degradation proteins [BR:nja01011]
 Precursor biosynthesis
  Amino acid ligase
   NSJP_1736 (ddlB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp_3 ATPgrasp_ST CPSase_L_D2 ATP-grasp_4 ATPgrasp_Ter ATP-grasp TTL ATP-grasp_5 ATPgrasp_YheCD
Motif
Other DBs
NCBI-ProteinID: SLM47908
UniProt: A0A1W1I4H0
LinkDB All DBs
Position
I:1658726..1659673
Genome map
AA seq 315 aa AA seqDB search
MGGQSSEREVSLRTGSAVHRALCRRGYDAVAIDVGPALSRDLQRHRIALAFLALHGPGGE
DGSIQGFLETLGIPYTGSGVQSSSVGMHKVTTKTILAAYDVPVPPGLVVKRGQIVSESRT
LRAAKLRWPVVVKPASEGSTIGVTIVKERAQWKKALALAHRYDRDAVVEAYIPGHEVTVS
LLGRGGRAPLVLPAVEIVAPGGFYDYSAKYEKGKTRYLCPAPLPAGVTKEIRAQALRAYE
VLDCAGAIRVDFRITPRGRPYVLEVNTAPGMTETSLLPMAAAQAGIGYEELTERILESAV
ARMSSHRPTGRSRRS
NT seq 948 nt NT seq  +upstreamnt  +downstreamnt
atgggagggcagtcctccgaacgggaggtgtcgctccgcaccggttcggccgttcatcgc
gctctttgtcgaagaggatatgacgccgtcgcgatcgacgtcggccccgccttgagccgg
gatcttcagaggcatcgaattgccttggcgttcttggccttgcacgggcctggaggggaa
gacgggtccattcaagggtttctggaaactctcggcattccgtatacgggatcgggtgtt
cagtccagctccgtcggcatgcataaagtcacgaccaagacgattctcgcggcgtacgat
gttccggttccgcccgggctggtggtgaaacgcggccagatcgtgtccgaaagcagaacc
cttcgggcagcgaaactgcgatggcccgtcgttgtgaagccggcatccgaaggatcgacg
atcggtgtgaccatcgtgaaggaacgagcacaatggaagaaggccctggcgctggcccat
cgctatgaccgagacgcggtggtcgaagcctacattcccggccatgaagtcacggtctca
ttgctcggccgtggcggccgggcaccgctcgtgttgccggcggtcgagatcgtcgcgccg
ggcggcttttatgactactccgccaagtatgaaaagggaaagacccgttatctctgtccg
gcgccgttgccggcgggcgtgacgaaggagatccgcgcgcaggcgttgcgggcgtatgag
gttctcgattgtgcaggagcgatccgcgtcgattttcgtattacgccacgcgggcgtccc
tacgtattggaggtcaatacggcgcctggcatgactgaaacgagcctacttccgatggcc
gccgcccaagccggtatcggttacgaagagttgacggaacggatcttggaatcggccgtg
gcacgcatgtcttctcatcgaccgacgggaaggagcaggcggtcatga

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