Nitrosospira lacus: EBAPG3_000200
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Entry
EBAPG3_000200 CDS
T04907
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
nlc
Nitrosospira lacus
Pathway
nlc00550
Peptidoglycan biosynthesis
nlc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nlc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
EBAPG3_000200 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
nlc01002
]
EBAPG3_000200 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
nlc01011
]
EBAPG3_000200 (dacB)
Enzymes [BR:
nlc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
EBAPG3_000200 (dacB)
Peptidases and inhibitors [BR:
nlc01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
EBAPG3_000200 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
nlc01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
EBAPG3_000200 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Beta-lactamase2
Motif
Other DBs
NCBI-ProteinID:
ARO88945
UniProt:
A0A1W6ST41
LinkDB
All DBs
Position
46259..47674
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AA seq
471 aa
AA seq
DB search
MPIAVGQALKQAGIPESAVGMYVQEIGAAKPLLAVNAGTAMNPASVMKLVTTFAGLELLG
PAYTWKTELYASGMLEGDTLRGNLVIKGYGDPKLNLENFWLLVRRLRQTGLREITGDLVL
DSSHFDLPGGNPAAFDGKPHRAYNVLPEALLVNYRTLALRLIPQPASKTIRVVVDPPLPS
LDLKNGLTLTNGPCNEWRDTLAADIRTAVNGDIRVSIALNGSYSTDCDEKTLYLSVHDTA
DYIFGLFRQLWEEQGGIFRGKVRTGTAPEGMTPLETHQSPPLADIVRDINKFSNNTAARQ
LYLALGLTTGLTPGSSPSMAAGDAANGHDRPPATLAKSDMALRRWLTSKRLSFPELVIEN
GSGLSRNERISTGHLGALLLAAFQSPVMPEFISSLPIAAVDGTMKKRLNGSATAGQAHIK
TGFLDGVRTMAGYVLDKSGRRVAVVMFINHPKSGIAQPAMDALLHWAYERP
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgccgatcgccgtcggtcaggcgctcaagcaggcaggcattcccgagtctgcggtaggt
atgtatgttcaggaaattggtgcagccaagccactgctcgccgtcaatgccggcacggcg
atgaatcccgcgtcggtaatgaagctggtcacgacttttgccggactggaactgctggga
ccggcgtatacctggaaaaccgaattatacgccagtggcatgcttgaaggcgatacactg
cgaggtaatctggtgatcaagggttacggcgaccccaagctgaatctggaaaatttctgg
ctgcttgtgcgacgcctgcgtcagaccgggttacgcgaaattacgggtgacctggtgctg
gatagcagccatttcgatttgcccggcggcaatccggccgccttcgacggcaagccccac
cgtgcatacaatgtgcttcccgaagcgctgctggtgaactaccgtacactggcgctacgc
ctgatcccgcagcctgcgagcaagaccattcgcgttgtagtcgatccgcctctgccatca
ctggacctcaaaaatggcctgacgcttaccaatggcccctgcaatgaatggcgcgacacg
ctcgccgccgatattcgcactgccgtcaatggcgacatccgcgtatcaattgcgcttaat
ggcagttattccactgactgtgacgaaaagaccttatatctcagcgtgcatgataccgcc
gattatatcttcggcctgttcaggcaattatgggaagaacagggtggaatattccgcggc
aaggtgcgcaccggcacggctccggaaggaatgacgccgctggaaacccatcaatcgccc
ccacttgccgacatcgttcgggatatcaacaaattcagtaacaacaccgcggcgcggcag
ctatatctcgcattagggctgaccacgggactgactcctggctcgtctccgagcatggct
gccggcgacgcagcaaatggccatgacaggccgcccgcaacgctcgccaaatcggatatg
gccctacggcgctggcttacgtccaaacggctcagttttcctgaattggttatcgaaaac
ggctcggggctatcacgcaatgagcgcatcagtaccggtcacctgggggcacttttgctg
gcggcgttccagagcccggtcatgcccgaattcatttcctccctgccgatcgcagcggtg
gatggaaccatgaagaagcgcctgaatggcagcgctaccgcgggacaggcccatatcaag
accggttttctggatggcgtgagaaccatggcaggttatgtgctcgataaatccggcagg
cgcgtagctgtggtcatgttcatcaatcatccaaaatcgggaattgcgcaaccagcaatg
gatgcgctgctgcattgggcttatgaaagaccatga
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