Nitrosospira lacus: EBAPG3_002835
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Entry
EBAPG3_002835 CDS
T04907
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
nlc
Nitrosospira lacus
Pathway
nlc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nlc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EBAPG3_002835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nlc03400
]
EBAPG3_002835
Enzymes [BR:
nlc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EBAPG3_002835
DNA repair and recombination proteins [BR:
nlc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EBAPG3_002835
RecFOR pathway proteins
EBAPG3_002835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_16
TIP49
Mg_chelatase
nSTAND3
Rad17
AAA_3
AAA_22
AAA_14
AAA_18
RNA_helicase
AAA_2
TsaE
DUF815
NTPase_1
IstB_IS21
AAA_17
AAA_28
TniB
NB-ARC
NACHT
AAA_33
AAA_24
bpMoxR
AAA_19
ABC_tran
AAA_25
Sigma54_activ_2
Motif
Other DBs
NCBI-ProteinID:
ARO86789
UniProt:
A0A1W6SLV3
LinkDB
All DBs
Position
622592..623632
Genome browser
AA seq
346 aa
AA seq
DB search
MIETDRLIASASVSLQEEELERALRPKHLSEYVGQEKIRGQLQIFIEAARRRREALDHVL
LFGPPGLGKTTLAHIIAREMGVSLRQTSGPVLERPGDLAALLTNLEPNDVLFIDEIHRLS
PVVEEILYPALEDYQLDIMIGEGPAARSVKLDLPPFTLVGATTRAGMLTNPLRDRFGIIS
RLEFYTVEELTKIVTRSAGLLNVEISTDGALEIARRSRGTPRIVNRLLRRVRDFAEVKAD
GYITRPVADAALIMLDVDLLGLDVMDRKLLLAVMEKFGGGPVGVDNLAAAISEERGTIED
VLEPYLIQQGYMKRTPRGRMATVIAYRHFGMALPKNGLSGELWEDQ
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgattgaaaccgatcgattaatcgcctccgcatccgtttctcttcaggaagaagagctg
gagcgagcgctgcgccccaagcatctgagcgaatatgtcggtcaggaaaaaattcgcggg
cagttgcagatatttatcgaagcagcaaggcggcgccgggaagcgcttgatcatgtgctg
ttgtttggtccacctggcttgggcaaaaccacacttgcccacattattgccagagagatg
ggcgtgagcctgcgtcagacttccggcccggtgctggagcgccccggcgatctggcggcg
ctgctgaccaatcttgagcccaacgacgtgctcttcatcgacgaaatccaccgtctctct
ccggtggtggaagaaattctttaccccgcgctggaggattatcagcttgacatcatgatc
ggcgaaggccccgcggcacgatcggtcaagctcgatttgccgccattcaccctggtgggc
gccaccacgcgcgcgggcatgctgaccaacccattgcgtgaccgctttggcattatttcg
cggcttgagttttataccgtggaagagctgacaaaaatcgtgacgcgctcagcggggttg
ctgaatgtggaaatttcgacggatggggcgttggaaatcgcgcgccgctcgcgtggcacg
ccgcgcattgtcaaccgcctgctgcggcgggtgcgcgatttcgctgaagtcaaagccgac
ggttacatcacccggccggtggctgacgcggcattgatcatgctggatgtggatctcctt
ggcctggacgtgatggacagaaagctgctgctggccgtcatggaaaaattcggtggggga
ccggtgggcgtggataatctcgctgccgccatcagtgaagagcgtggcaccattgaagat
gtgctggaaccgtacctgatccagcagggctacatgaagcgcacgccgcgcggccgcatg
gccacggtcatcgcctatcggcatttcggcatggcgctgccaaagaatgggttgagcgga
gagctgtgggaagatcaatag
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