Nomascus leucogenys (northern white-cheeked gibbon): 100579422
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Entry
100579422 CDS
T03265
Symbol
SLC6A12
Name
(RefSeq) sodium- and chloride-dependent betaine transporter
KO
K05045
solute carrier family 6 (neurotransmitter transporter, betaine/GABA) member 12
Organism
nle
Nomascus leucogenys (northern white-cheeked gibbon)
Pathway
nle04721
Synaptic vesicle cycle
nle04727
GABAergic synapse
Brite
KEGG Orthology (KO) [BR:
nle00001
]
09150 Organismal Systems
09156 Nervous system
04727 GABAergic synapse
100579422 (SLC6A12)
04721 Synaptic vesicle cycle
100579422 (SLC6A12)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nle02000
]
100579422 (SLC6A12)
Transporters [BR:
nle02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
100579422 (SLC6A12)
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
100579422
NCBI-ProteinID:
XP_030660510
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Position
23:32490058..32517254
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AA seq
616 aa
AA seq
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MAMDGKVAVQEHGPPAASWVPEEGEKLDQEDEDQVKDRGQWTNKMEFVLSVAGEIIGLGN
VWRFPYLCYKNGGGAFFIPYFIFFFVCGIPVFFLEVALGQYTSQGSVTAWRKICPLFQGI
GLASVVIESYLNVYYIVVLAWALFYLFSSFTSELPWTTCNNFWNTEHCMDFLNHSGAGTV
TPSENFTSPVMEFWERRVLGITSGIHDLGALRWELALCLLLAWVICYFCIWKGVKSTGKV
VYFTATFPYLMLVILLIRGVTLPGAYQGIIYYLKPDLFRLKDPQVWMDAGTQIFFSFAIC
QGCLTALGSYNKYHNNCYKDCIALCFLNSATSFVAGFVVFSILGFMSQEQGVPISEVAES
GPGLAFIAFPKAVTMMPLSQLWSCLFFIMLIFLGLDSQFVCVECLVTASIDMFPRQLQKS
GRRELLILSIAVTCYLIGLFLVTEGGMYIFQLFDYYASSGICLLFLSVFEVVCISWVYGA
DRFYDNIEDMIGYRPWPLVKISWLFLTPGLCLATFLFSLSKYTPLKYNNVYVYPPWGYSI
GWFLALSSMVCVPLFVIITLLKTQGSFKKRLRQLITPDSSLPQPKQHLYLDGSAGQNFGP
SPAKEGLIAGEKETHL
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggccatggacgggaaggtggcagtgcaagagcatgggcctcctgcggcctcctgggtc
cccgaggagggagagaagttggaccaggaagacgaggaccaggtgaaggatcggggccaa
tggaccaacaagatggagtttgtgctgtcagtggccggggagatcattgggctgggcaat
gtctggaggtttccctatctctgctacaaaaacggaggtggagccttcttcatcccctac
ttcatcttcttctttgtctgcggcatcccggtgttcttcctggaggtggcgttgggccaa
tacaccagccaagggagtgtcacagcctggaggaagatctgtcccctcttccagggcatc
ggtctggcgtctgtggtcattgagtcatatttgaatgtctactacatcgtcgtccttgcc
tgggctctgttctacctgttcagctccttcacctctgagctgccctggacgacctgcaac
aacttttggaacacagagcattgcatggactttctgaaccactcaggagccggcacagtg
accccatctgagaattttacctcacctgtcatggaattctgggagagacgagttctgggc
atcacctcgggcatccatgacctgggcgccctgcgctgggagctggccctgtgcctcctg
ctcgcctgggtcatctgctatttctgcatctggaagggggtcaagtccacaggcaaggtg
gtttatttcacagccacgtttccgtacctgatgcttgtcatcttgctgatccgaggtgtc
acccttcccggagcctaccagggcatcatctattacttgaagccagatttgttccgcctc
aaggaccctcaggtgtggatggatgcgggcacccagatattcttctcctttgccatctgc
caggggtgcctgacagccctgggcagctacaacaagtaccacaacaactgctacaaggac
tgcatcgccctctgcttcctgaacagtgccaccagctttgtggctgggtttgttgtcttc
tccatcctgggcttcatgtcccaagagcaaggggtgcccatttctgaagtggccgagtca
ggtcctgggctggccttcatcgccttccccaaggctgtgactatgatgcccttatcccag
ctgtggtcctgtctcttctttatcatgctcatattcctagggctggacagccagtttgtc
tgtgtggagtgcctggtgacagcctccatagacatgttccccaggcagctccagaagagc
gggcggcgcgagctcctcatcctcagcatcgctgtcacgtgctacctcatagggctcttc
ctggtcaccgagggcgggatgtacatcttccagctgtttgactactatgcttccagtggc
atatgcctgctgttcctgtcagtgtttgaagtggtctgcatcagctgggtgtatggggcg
gaccgtttctatgacaacattgaggacatgattggctaccggccatggcccctggtgaag
atctcctggctcttcctgactcctggactttgcctggccactttcctcttctccttgagc
aagtacacccccctcaagtacaacaacgtctatgtgtacccgccctggggatactccatt
ggctggttcctggctctgtcttccatggtctgtgtcccactcttcgtcatcatcaccctc
ttgaagactcagggttctttcaagaagcgcctgcgtcagctcatcacccctgactccagt
ctgccgcagcccaagcaacatctctacttggatggcagtgctggccagaactttgggccc
tccccagcaaaggaaggactgatagccggggagaaggagacccatttgtag
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