KEGG   Nomascus leucogenys (northern white-cheeked gibbon): 100581330Help
Entry
100581330         CDS       T03265                                 

Gene name
SETDB1
Definition
(RefSeq) SET domain bifurcated 1
  KO
K11421  histone-lysine N-methyltransferase SETDB1 [EC:2.1.1.43]
Organism
nle  Nomascus leucogenys (northern white-cheeked gibbon)
Pathway
nle00310  Lysine degradation
nle04550  Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:nle00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    100581330 (SETDB1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04550 Signaling pathways regulating pluripotency of stem cells
    100581330 (SETDB1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:nle03036]
    100581330 (SETDB1)
Enzymes [BR:nle01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.43  histone-lysine N-methyltransferase
     100581330 (SETDB1)
Chromosome and associated proteins [BR:nle03036]
 Eukaryotic Type
  Histone modification proteins
   HMTs (histone methyltransferases)
    HKMTs (histone lysine methyltransferases)
     100581330 (SETDB1)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    100581330 (SETDB1)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: SET DUF5604 Tudor_4 TUDOR_5 Pre-SET MBD DUF4537 Chromo
Motif
Other DBs
NCBI-GeneID: 100581330
NCBI-ProteinID: XP_012366534
LinkDB All DBs
Position
12
AA seq 1290 aa AA seqDB search
MSSLPGCIGLDAATATVESEEMAELQQAVVEELGISMEELRHFIDEELEKMDCVQQRKKQ
LAELETWVIQKESEVAHVDQLFDDASRAVTNCESLVKDFYSKLGLQYRDSSSEDESSRPT
EIIEIPDEDDDVLSIDSGDAGSRTPKDQKLREAMAALRKSAQDVQKFMDAVNKKSSSQDL
HKGTLSQMSGELSKDGDLIVSMRILGKKRTKTWHKGTLIAIQTVGPGKKYKVKFDNKGKS
LLSGNHIAYDYHPPADKLYVGSRVVAKYKDGNQVWLYAGIVAETPNVKNKLRFLIFFDDG
YASYVTQSELYPICRPLKKTWEDIEDISCRDFIEEYVTAYPNRPMVLLKSGQLIKTEWEG
TWWKSRVEEVDGSLVRILFLDDKRCEWIYRGSTRLEPMFSMKTSSASALEKKQGQLRTRP
NMGAVRSKGPVVQYTQDLTGTGTQFKPVELPQPTAPPAPPFPPAPPLSPQAGDSDLESQL
AQSRKQVAKKSTSFRPGSVGSGHSSPTSPALSENVSGGKPGINQMYRSPLGSTASAPAPS
ALPAPPAPPAFHGMLERAPAEPSYRAPMEKLFYLPHVCSYTCLSRVRPMRNEQYRGKNPR
WPLLYDFRRMTARRRVNRKMGFHVIYKTPCGLCLRTMQEIERYLFETGCDFLFLEMFCLD
PYVLVDRKFQPYKPFYYILDITYGKEDVPLSCVNEIDTTPPPQVAYSKERIPGKGVFINT
GLFFLVGCDCKDGCRDKSKCACHQLTIQATACTPGGQINPNSGYQYKRLEECLPTGVYEC
NKRCKCDPNMCTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDIAKGSFVCIYAGKILTDDF
ADKEGLEMGDEYFANLDHIESVENFKEGYESDAPCSSDSSGVDLKDQEDGNSGTEDPEES
NDDSSDDNFCKDEDFSTSSVWRSYATRRQTRGQKENGLSETTSKDSHPPDLGPPHIPVPP
SIPVGGCNPPSSEETPKNKVASWLSCNSVSEGGFADSDSHSSFKTNEGGEGRAGGSRMEA
EKAPTSGLGIKDEGDIKQSKKEDPEDRNKLSVVTESSRNYGYNPSPVKPEGLRRPPSKTS
MHQSRRLMASAQSNPDDVLTLSSSTESEGESGTSRKPTAGQTSATAVDSDDIQTISSGSE
GDDFEDKKNMTGPMKRQVAVKSTRGFALKSTHGIAIKSTNMASVDKGESAPVRKNTRQFY
DGEESCYIIDAKLEGNLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFASKRIRAGTEL
TWDYNYEVGSVEGKELLCCCGAIECRGRLL
NT seq 3873 nt NT seq  +upstreamnt  +downstreamnt
atgtcttcccttcctgggtgcattggtttggatgcagcaacagctacagtggagtctgaa
gagatggcagagctgcaacaggcagtggttgaggaactgggtatctctatggaggaactt
cggcatttcatcgatgaggaactggagaagatggattgtgtacaacaacgcaagaagcag
ctagcagagttagagacatgggtaatacagaaagaatctgaggtggctcacgttgaccag
ctctttgatgatgcatccagggcagtgactaattgtgagtctttggtgaaggacttctac
tccaagctgggactacaataccgggacagtagctctgaggatgaatcttcccggcctaca
gaaataattgagattcctgatgaagatgatgatgtcctcagtattgattcaggtgatgct
gggagcagaactccaaaagaccagaagctccgtgaagccatggctgccttaagaaagtca
gcccaagatgttcagaagttcatggatgctgtcaacaagaagagcagttcgcaggatctg
cataaaggaaccttgagtcagatgtctggagaactaagcaaagatggtgacctgatagtc
agcatgcgaattctgggcaagaagagaactaagacttggcacaaaggcacccttattgcc
atccagacagttgggccagggaagaaatacaaggtgaaatttgacaacaaaggaaagagt
ctactgtcggggaaccatattgcctatgattaccaccctcctgctgacaagctgtatgtg
ggcagtcgggtggtcgccaaatacaaagatgggaatcaggtctggctctatgctggcatt
gtagctgagacaccaaacgtcaaaaacaagctcaggtttctcattttctttgatgatggc
tatgcttcctatgtcacacagtcagaactgtatcccatttgccggccactgaaaaagact
tgggaagacatagaagacatctcctgccgtgacttcatagaggagtatgtcactgcctac
cccaaccgccccatggtactgctcaagagtggccagcttatcaagactgagtgggaaggc
acgtggtggaagtcccgagttgaggaggtggatggcagcctagtcaggatcctcttcctg
gatgacaaaagatgtgagtggatctatcgaggctctacacggctggagcccatgttcagc
atgaaaacatcctcagcctctgcactggagaagaagcaaggacaactcaggacacgtcca
aatatgggtgctgtgaggagcaaaggccctgttgtccaatacacacaggatctgactggt
actggaacccagttcaagccagtggaactcccacagcctacagctccacctgccccacct
ttcccacctgctccacctctatccccccaagcaggtgacagtgacttggaaagccagctt
gcccagtcacggaagcaggtagccaaaaagagcacgtcctttcgaccaggatctgtgggc
tctggtcattcctcccctacatctcctgcactcagtgaaaatgtctctggtgggaaacct
gggatcaaccagatgtatagatcacctttaggctccacagcctctgccccagcgccttca
gcactcccagcccctccagcacccccagccttccatggcatgctggagcgggccccagca
gagccctcctaccgtgctcccatggagaagcttttctacttacctcatgtctgcagctat
acctgtctgtctcgagtcagacctatgaggaatgagcagtaccggggcaagaaccctcgc
tggcccttactgtatgacttccggcggatgacagcccggcgtcgagttaaccgcaagatg
ggctttcatgttatctataaaacaccttgtggtctctgccttcggacaatgcaggagatt
gaacgctaccttttcgagactggctgtgacttcctcttcctggagatgttctgtttggat
ccatatgttcttgtggaccgaaagtttcagccctataagcctttttactatattttggac
atcacttatgggaaggaagatgttcccctatcctgtgtcaatgagattgacacaacccct
ccaccccaggtggcctacagcaaggaacgtatcccgggcaagggtgttttcattaacaca
ggtctgttttttctggttggctgtgactgcaaggatgggtgtcgggacaagtccaagtgt
gcctgccatcaactaactatccaggctacagcctgtaccccaggaggccaaatcaaccct
aactctggctaccagtacaagagactagaagagtgtctacccacaggggtatatgagtgt
aacaaacgctgcaaatgtgacccaaacatgtgcacaaaccggttggtgcaacatggacta
caagttcggctacagctattcaagacacagaacaagggctggggtatccgctgcttggat
gacattgccaaaggctcttttgtctgtatttatgcaggtaaaatcctgacagatgacttt
gcagacaaggagggtctggaaatgggtgatgagtactttgcaaatctggaccatatcgag
agcgtggagaacttcaaagaaggatatgagagtgatgccccctgttcctctgacagcagt
ggtgtagacttgaaggaccaggaagatggcaacagcggtacagaggaccctgaagagtcc
aatgatgatagctcagatgataacttctgtaaggatgaggacttcagcaccagttcagtg
tggcggagctatgctacccggaggcagacccggggccagaaagagaatggactctctgag
acaacttccaaggactcccaccccccagatcttggacccccacatattcctgttcctccc
tcaatccctgtaggtggctgcaatccaccttcctccgaagagacacccaagaacaaggtg
gcctcatggttgagctgcaatagtgtcagtgaaggtggttttgctgactctgatagccat
tcatccttcaagactaatgaaggtggggagggccgggctgggggaagccgaatggaggct
gagaaggcccccacctcaggactaggcatcaaggatgagggagacatcaaacagtccaag
aaagaggaccctgaggaccgaaacaagctgtcagtagttactgaaagctctcgaaattac
ggttacaatccttctcctgtgaagcctgaaggacttcgccgcccacctagtaagactagt
atgcatcaaagccgaagactcatggcttctgctcagtcaaaccctgatgatgtcctgaca
ctgtccagcagcacagaaagtgagggggaaagtgggaccagccgaaagcccactgctggt
cagacttcggctacagcggttgacagtgatgatatccagaccatctcctctggctctgaa
ggggatgactttgaggacaagaagaacatgactggtccaatgaagcgtcaagtggcagta
aaatcaacccgaggctttgctcttaaatcaacccatgggattgcaattaaatcaaccaac
atggcctctgtggacaagggggagagcgcacctgttcgtaagaacacacgccaattttac
gatggcgaggagtcttgctacatcatcgatgccaagcttgaaggcaacctgggccgctac
ctcaaccacagttgcagccccaacctgtttgtccagaatgtcttcgtggatacccatgat
cttcgcttcccctgggtggccttctttgccagcaaaagaatccgggccgggacagaactt
acttgggactacaactacgaggtgggcagtgtggaaggcaaggagctgctctgttgctgt
ggggccattgaatgcagaggccgtcttctttag

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