Numida meleagris (helmeted guineafowl): 110403676
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Entry
110403676 CDS
T06015
Symbol
BLM
Name
(RefSeq) Bloom syndrome protein isoform X1
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
nmel
Numida meleagris (helmeted guineafowl)
Pathway
nmel03440
Homologous recombination
nmel03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
nmel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
110403676 (BLM)
03460 Fanconi anemia pathway
110403676 (BLM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nmel03032
]
110403676 (BLM)
03400 DNA repair and recombination proteins [BR:
nmel03400
]
110403676 (BLM)
Enzymes [BR:
nmel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
110403676 (BLM)
DNA replication proteins [BR:
nmel03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
110403676 (BLM)
DNA repair and recombination proteins [BR:
nmel03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
110403676 (BLM)
Bloom's syndrome complex (BTR)
110403676 (BLM)
FA (Fanconi anemia) pathway
110403676 (BLM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
BLM_N
BDHCT
RecQ_Zn_bind
Helicase_C
HRDC
RQC
BDHCT_assoc
ResIII
Motif
Other DBs
NCBI-GeneID:
110403676
NCBI-ProteinID:
XP_021262908
LinkDB
All DBs
Position
9:complement(19693080..19709203)
Genome browser
AA seq
1366 aa
AA seq
DB search
MAAVPQNNLREQLRLHSARSALSKVPPARSRPAAFTFRKTHSPAAGPAALRDKDVNTSLG
PGGAARPKELRAGPLGSRPALPGPAGSSGPVPGAPPCPVPVPGPAASVGDEWDDMDDFDL
SGFEKKFSRPAVLSPKGPRTPQGPGLCVSKARGGAGPQERGAKVHCSQGSSQGSIICVGD
TRAPTAAVVLDNEREEAHAATNERSGESQELSNGEKSSRLELDEVGNELLADIELEEDDY
LDVVPPSPEEELPSFSPSVRSVSNIFKESPTDRRSMVHGTESEPELTAPKQPAAERDPSA
EHADKGLHLEQQLYSVMEGICKLVDAIPIHELTSVSCAKELLQQRELRRKLLADSAALNT
ISTNVFPRNWKACAQQDPSSRPGTPLCSGPGRGVSSVGSTPKSTNLPSVLSRTVNSNCLS
TTKNQTLDNLDTSCASKETDQEVICLEAAALSSPRVNGRGSANLSRPSEASFNGSWCEKP
ARRDSGNWHLPERPPASSALKAQHRAPAGAPASGCSDVNDTDFDLDHFDIDDFDEGWEDA
AAAVAPEAPPAPLRQPLREGPASLHCRLLPAPAGSAPGSHPTAPKSSCGIAAKNRSEPLV
HNPAHERFRGMKFSHSEEMLKTFHRKFGLHSFRTNQLEAINAALLGEDCFILMPTGGGKS
LCYQLPACVSAGVTVVISPLRSLIIDQVQKLKTLDIAATYLTGDITDADASKIYMQLSKK
DPIIKLLYVTPEKVCASNRLLSALENLYDRKLLARFVIDEAHCVSQWGHDFRKDYKRLNM
LRKKFRAVPMMALTATANPRVQKDIQNQLEMLKPQVFTMSFNRHNLKYDVLPKKPKKVAM
DCLEWIKKYHPHDSGIIYCLSRHECDTTAAILQKEGLAALAYHAGLTDSNRDLVQKKWVN
QEGCQVICATIAFGMGIDKPDVRYVIHASLPKSIEGYYQESGRAGRDGEMSHCLLFYSYS
DVTRLRRLILTEKDGNSHTRQTHFNNLYSMVHYCENVVDCRRIQLLAYFGETDFNPNFCK
DHPEVICDNCSRKKDYKSRNVTDEVKSIIRFVQQHCGQMGGINGSRNTGSGRYTLNMMVD
IFLGAKSAKIQSGIFGKGAAYSRHNVERLFRKLVLDKILDEDLYITANDQAVAYVVLGER
AQAVLNGLLQVEFHETENASAIRKQRASVTKMSQREEMVKKCLGELTDTCKTLGKIFDVH
YFNIFSTSTLKKIAETLSSDVEVLLQIDGVTEDKLEKYGAEIIKVMDKYSEWATPEDAAC
QSVDTAPGSAGTPGSEEETEDDIVTSSYFGGNANQRRKRKKVPNFRESKRKKTSSGSSQQ
FHSKGGKYRRMRRAPSSRAAAAARLGLMAPPKPSRRQFLQPSYAVL
NT seq
4101 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtgccgcaaaacaacctgcgggagcagctgcggctgcactcggcccgcagc
gccctcagcaaagtgccgcctgcgcgcagccggcccgcggccttcaccttccgtaaaacg
cacagcccggccgctgggcccgcggcgctgcgcgacaaggacgtaaacacctcgctgggc
cctgggggcgccgccaggcccaaagagctccgtgcggggccgctcgggagccgcccggcg
ctgcccggacccgcggggagctctgggcccgtccctggggccccgccgtgccccgtgccc
gtgccgggccccgctgcctccgtgggcgatgagtgggacgacatggacgacttcgacctg
tccggctttgagaagaagttctccaggccggccgtgctgtccccgaaggggccaaggact
ccacaggggcctggtctgtgtgtcagcaaggcgcgaggtggtgcagggccccaggagcgt
ggggccaaggtgcactgctcacagggctcctcgcagggctccatcatctgtgtgggcgac
accagagcccccactgctgccgtggttttggacaatgagagggaagaggctcatgcagct
acgaatgagagaagtggtgaaagccaggagctaagtaatggtgagaagagcagccggctg
gaactggacgaggttggcaacgagctgctggcagacattgagctcgaagaggatgattac
ttggatgtagttccaccctctcctgaggaagagctgccttccttctcaccgtctgtaaga
agtgttagtaatatctttaaagaatctcctactgatcgaagatcaatggttcacggcacg
gagtctgagcctgagctgactgcaccaaagcagcctgctgctgagcgggaccctagtgca
gagcatgcagataaaggcttgcatttggaacagcaactctacagcgtcatggaaggtatt
tgtaagctggtggatgccattccaattcatgagcttacgtctgtctcatgtgcaaaagaa
cttcttcagcagagagagctccggagaaaattgttagctgattctgctgctttgaacaca
attagcacaaacgtttttcctagaaattggaaagcatgtgctcagcaagacccttcctca
cgtcctggtacgcctctgtgttccggccctggtcggggtgtgagttctgttggcagcaca
ccgaaatccacaaaccttccgtctgtgctttccaggactgttaattcaaactgtttgtct
acaacaaaaaatcagacacttgataacttggatacttcctgtgcttcgaaggaaactgat
caggaggtcatctgcctggaagctgcagcactttcttccccccgggtgaatggcagaggc
agcgccaatctcagccgtccctcggaggcatcattcaatggcagctggtgcgaaaaacct
gcaaggagagacagtgggaactggcatctgcccgagaggccccctgcaagcagtgctctg
aaagcccagcacagagcccctgctggcgctcccgcatcgggctgctcggatgtgaatgat
acagactttgatctcgatcactttgatattgatgatttcgatgagggttgggaggatgcg
gccgctgcggtggcacccgaagcgccgcctgcgcccctgaggcagccgctcagggaaggc
cctgcctctctgcactgcaggctgctccctgcgcccgctgggtctgccccgggctcacat
cccactgctccaaaatcgagctgcgggatcgcggcaaagaaccgctcagagccactggtt
cataaccccgcacacgaacgtttcagggggatgaaattttcccattctgaagaaatgttg
aaaacgtttcacagaaagtttggtttgcactctttccggacaaatcagctggaggccatc
aatgctgctcttctgggagaagactgcttcatcttaatgcccactggtggtggtaaaagt
ttgtgctaccagttaccagcgtgtgtctctgctggagtcactgttgtcatttctcccctg
aggtcactgataatagaccaagttcagaagctgaaaaccttagatatagctgcaacgtac
ctgactggtgatataacagatgctgatgcttcaaagatatatatgcagttgtcaaaaaaa
gatcctataataaagctcctgtatgttacccctgagaaggtttgtgcaagcaaccgactg
ctgtcagccctggaaaatctctacgaccggaaactcctagcgcgttttgtcattgacgag
gcccactgtgttagccagtggggtcatgattttcgaaaagactacaaacgactgaatatg
ctccgcaagaagtttcgcgctgttcctatgatggctctcactgccaccgctaacccaaga
gtgcaaaaggatattcagaatcagctggagatgctgaaaccacaagtgtttacaatgagc
ttcaacaggcataacttgaaatatgatgtattgcccaagaagccaaagaaggtggcaatg
gattgcttggaatggattaaaaaataccatccacatgactctgggataatttattgcctt
tcccgacacgagtgtgacacgacagcggccattctgcagaaggaaggtcttgctgcactt
gcctatcatgctggcctcactgactccaacagagatctggtacaaaagaagtgggttaat
caagaaggatgccaggttatatgtgcaacaattgcctttggaatggggatagataaaccc
gacgtacgctatgtcatccacgcttcccttccgaaatctatcgaaggctactaccaggag
tccgggcgggcgggccgggatggggagatgtcccactgcctgctcttctacagctacagc
gatgtcaccaggctcaggaggctcattctgacggagaaggatggaaacagtcacacgagg
cagacccacttcaacaacctgtacagcatggtgcattactgcgagaacgtagttgactgc
cggagaattcagcttctggcctactttggggaaactgattttaatcctaacttttgtaaa
gatcacccggaagttatttgtgataactgcagtaggaagaaggactacaaatcaagaaat
gtaaccgatgaagtgaaaagcatcataagatttgtacagcaacattgtggacaaatggga
ggaataaatggaagtagaaatacaggctctggaagatacacgctgaatatgatggtagac
attttcttgggtgcaaagagcgcgaagatccagtctggaatatttgggaagggcgctgcc
tactcacgccacaacgttgaaaggctgttcagaaagctggtcttggacaagatcctggat
gaagacctgtacatcacagctaatgaccaagctgtggcctacgtagttctaggagagaga
gcgcaggcggtgctaaatgggttgctacaggtggaatttcatgaaactgaaaatgccagt
gccattagaaagcaaagggcttctgtgacaaaaatgtcacagcgggaagagatggttaaa
aagtgccttggggaacttacagacacctgcaaaactcttgggaagatctttgatgtccat
tacttcaatattttcagtacttcaactctaaagaaaatagcagaaaccttgtcttctgat
gtggaggttttgctgcagatcgatggtgtcacagaagataaactggagaaatatggtgca
gaaatcataaaagtgatggataagtactcggaatgggcaacgccagaagatgctgcctgc
cagagtgtggacacagccccggggagcgctggcacgcctgggagtgaggaagaaacagaa
gatgacattgtgacctcgagctattttggcggcaacgcaaaccaaagaaggaagaggaaa
aaggtgccaaacttcagagaatccaagaggaaaaagacgagcagtggcagcagccagcag
tttcattccaaagggggcaagtacaggcggatgcgaagggcgcccagctccagggctgca
gctgctgcacggctgggcctcatggcaccgcccaagccaagcaggaggcagttcctgcag
ccttcctacgccgtgctgtag
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