Numida meleagris (helmeted guineafowl): 110406369
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Entry
110406369 CDS
T06015
Symbol
SMARCB1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
nmel
Numida meleagris (helmeted guineafowl)
Pathway
nmel03082
ATP-dependent chromatin remodeling
nmel03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
nmel00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110406369 (SMARCB1)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
110406369 (SMARCB1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
nmel01009
]
110406369 (SMARCB1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nmel03021
]
110406369 (SMARCB1)
03036 Chromosome and associated proteins [BR:
nmel03036
]
110406369 (SMARCB1)
Protein phosphatases and associated proteins [BR:
nmel01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
110406369 (SMARCB1)
Transcription machinery [BR:
nmel03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
110406369 (SMARCB1)
SWI/SNF complex
110406369 (SMARCB1)
Chromosome and associated proteins [BR:
nmel03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
110406369 (SMARCB1)
PBAF complex
110406369 (SMARCB1)
SWI/SNF complex
110406369 (SMARCB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
DUF1679
Motif
Other DBs
NCBI-GeneID:
110406369
NCBI-ProteinID:
XP_021268463
LinkDB
All DBs
Position
14:8335198..8345224
Genome browser
AA seq
386 aa
AA seq
DB search
MMMMALSKTFGQKPVKFQLEEDGEFYMIGSEVGNYLRMFRGSLYKRYPSLWRRLATVEER
KKIVASSHENQRSHSPRRYHGYTTLATSVTLLKASEVEEILDGNDEKYKAVSISTEPPTY
LREQKAKRNNQWVPTLPNSSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHEN
ASQPEVLVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFSEILCDDLDLNPLTFVPAIAS
AIRQQIESYPTDSILEDQSDQRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCS
ELGLGGEFVTTIAYSIRGQLSWHQKTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDA
EMEKKIRDQDRNTRRMRRLANTAPAW
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgatggcgctgagcaaaacctttgggcagaagcccgtcaagttccagctggag
gaggacggcgagttctacatgatcggctccgaggtggggaactacctgcgtatgttccgg
ggctcgctgtacaagaggtatccctctctctggagacgactagccacagtggaagaaagg
aagaagatagtggcatcttcacatgaaaatcagcggtctcacagtcccagaagatatcat
ggatatacaacattagccaccagtgtgacgctgttaaaggcctctgaagtggaagagatc
ttggatggaaatgatgagaaatacaaggcagtgtctatcagcacagaacctcccacctac
ctcagggaacagaaggcaaagaggaacaaccagtgggtgccaacactgcccaacagctct
caccacctggatgcggtgccatgctcaacaacaattaacagaaatcgcatgggcagggac
aagaagaggactttccctctgtgctttgatgaccatgacccagcagtcatccatgagaac
gcatcccagccggaggttctggttccaatcaggcttgatatggaaattgatgggcagaaa
ctcagagatgcatttacatggaacatgaatgaaaagctgatgaccccagaaatgttctct
gagattctttgtgatgacctggatttgaatcctctgacctttgtccctgctattgcctct
gccatccgacaacagatcgaatcatacccaactgacagtatcctagaggatcagtcagac
caacgcgttattattaagctaaacatccatgtggggaacatctcccttgtagaccagttt
gaatgggacatgtcagagaaggagaattcaccagagaaatttgccttgaagctgtgctca
gagcttggcctgggtggggagtttgtcactactattgcctacagcatccggggacagctg
agctggcatcagaagacatacgccttcagtgagaaccctttgccgactgtggaaatcgca
attcgcaacacgggggatgctgaccagtggtgccctcttctggaaaccctcacagatgcc
gagatggagaagaagatcagagaccaggacagaaatacaaggcgcatgcgacgcttggcc
aacactgctccagcctggtaa
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