Neisseria meningitidis M01-240149 (serogroup B): NMBM01240149_1953
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Entry
NMBM01240149_1953 CDS
T01930
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase, beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
nmm
Neisseria meningitidis M01-240149 (serogroup B)
Pathway
nmm03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nmm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NMBM01240149_1953 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nmm03021
]
NMBM01240149_1953 (rpoC)
03400 DNA repair and recombination proteins [BR:
nmm03400
]
NMBM01240149_1953 (rpoC)
Enzymes [BR:
nmm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NMBM01240149_1953 (rpoC)
Transcription machinery [BR:
nmm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NMBM01240149_1953 (rpoC)
DNA repair and recombination proteins [BR:
nmm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NMBM01240149_1953 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Biotin_lipoyl_2
Apocytochr_F_C
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
ADY98487
LinkDB
All DBs
Position
complement(2123084..2127259)
Genome browser
AA seq
1391 aa
AA seq
DB search
MNLLNLFNPLQTAGMEEEFDAIKIGIASPETIRSWSYGEVKKPETINYRTFKPERDGLFC
AKIFGPVKDYECLCGKYKRLKFKGVTCEKCGVEVTLSKVRRERMGHIELAAPVAHIWFLK
SLPSRLGMVLDMTLRDIERVLYFEAFVVTDPGMTPLQRRQLLTEDDYYNKLDEYGDDFDA
KMGAEGIRELLRTLNVAGEIEILRQELESTGSDTKIKKIAKRLKVLEAFHRSGMKLEWMI
MDVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELHAPDIIVRNEKRM
LQEAVDSLLDNGRRGKAMTGANKRPLKSLADMIKGKGGRFRQNLLGKRVDYSGRSVITVG
PYLRLHQCGLPKKMALELFKPFIFHKLEKQGLASTVKAAKKLVEQEVPEVWDILEEVIRE
HPIMLNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQM
EARTLMLASNNVLSPANGEPIIVPSQDIVLGLYYMTRDRINAKGEGSLFADVKEVHRAYH
TKQVELGTKITVRLREWVKNEAGEFEPVVNRYETTVGRALLSEILPKGLPFEYVNKALKK
KEISKLINASFRLCGLRDTVIFADHLMYTGFGFAAKGGISIAVDDMEIPKEKAALLAEAN
AEVKEIEDQYRQGLVTNGERYNKVVDIWGRAGDKIAKAMMDNLSKQKVIDRAGNEVDQES
FNSIYMMADSGARGSAAQIKQLSGMRGLMAKPDGSIIETPITSNFREGLTVLQYFIATHG
ARKGLADTALKTANSGYLTRRLVDVTQDLVVVEDDCGTSDGFVMKAVVQGGDVIEALRDR
ILGRVTASDVVDPSSGETLVEAGTLLTEKLVDMIDQSGVDEVKVRTPITCKTRHGLCAHC
YGRDLARGKLVNAGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAASQVEAKSNGTA
RFSSQMRYVANNKGELVVIGRSCEVVIHDDIGRERERHKVPYGAILLVQDGMAIKAGQTL
ATWDPHTRPMITEHAGMVKFENVEEGVTVAKQTDDVTGLSTLVVIDGKRRSSSASKLLRP
TVKLLDENGVEICIPGTSTPVSMAFPVGAVITVREGQEIGKGDVLARIPQASSKTRDITG
GLPRVAELFEARVPKDAGMLAEITGTVSFGKETKGKQRLIVTDVDGVAYETLISKEKQIL
VHDGQVVNRGETIVDGAVDPHDILRLQGIEALARYIVQEVQEVYRLQGVKISDKHIEVII
RQMLRRVNIADAGETGFITGEQVERGDVMAANEKALEEGKEPARYENVLLGITKASLSTD
SFISAASFQETTRVLTEAAIMGKQDELRGLKENVIVGRLIPAGTGLTYHRSRHQQWQEVE
QETAETQVTDE
NT seq
4176 nt
NT seq
+upstream
nt +downstream
nt
atgaatttgttgaacttatttaatccgttgcaaactgccggcatggaagaagagtttgat
gccattaaaatcggtattgcctctcccgaaaccatccgctcatggtcttatggcgaagtt
aaaaaacctgaaaccatcaactaccgtacgttcaaacccgagcgcgacggcttgttctgc
gccaaaatctttggcccggtcaaagactacgaatgcttgtgcggtaaatacaaacgcttg
aaatttaaaggtgtaacttgtgaaaaatgcggcgtggaagtaaccctgtccaaagtacgc
cgcgaacgtatgggtcacattgaattggccgcgcccgtcgcacacatttggttcttaaaa
tccctgccttcccgcttgggtatggtgttagacatgactttgcgcgacatcgagcgcgta
ttgtactttgaagcatttgtggtaaccgatcccggtatgactccgctgcaacgccgccaa
ttgctgactgaagacgattactacaacaagctggacgaatacggcgacgacttcgatgcc
aaaatgggtgcagaaggtatccgcgaattgctgcgtaccttgaatgtagcaggcgaaatc
gaaatcctgcgtcaagagctggaatcgaccggttccgacaccaaaatcaaaaaaatcgcc
aaacgcttgaaagtattggaagccttccatcgttccggtatgaaattggaatggatgatt
atggatgtgctgccggtattacctcccgatttgcgtcctttggttccgttggacggcggc
cgttttgccacttccgatttgaacgatttgtaccgccgcgtcatcaaccgcaacaaccgt
ctgaaacgcctgctggaactgcacgcgcccgacattatcgtccgcaacgaaaaacgtatg
ttgcaagaagcagttgactcgctgttggataacggtcgtcgcggtaaagccatgaccggt
gccaacaaacgtccgctgaaatcattggcagacatgattaaaggtaaaggcggtcgcttc
cgtcaaaacctgttgggcaaacgtgtggactactccggccgttccgtgattaccgtaggc
ccatacctgcgtctgcaccaatgtggtctgccgaaaaaaatggctttggaactgttcaaa
ccgttcattttccacaaattggaaaaacaaggtctggcttccaccgttaaagcagcgaaa
aaattggtagagcaagaagtaccggaagtatgggacatcttggaagaagtcatccgcgaa
catccgattatgctgaaccgtgcgccgaccctgcaccgtttgggtattcaagcgtttgaa
cctatcttgattgaaggtaaagcgattcagttgcacccattggtgtgtgccgcgttcaac
gccgactttgacggcgaccaaatggcggtacacgttccattgagcttggaagcacaaatg
gaagcacgcacgctgatgctggcttcaaacaacgtattgtctcctgccaacggcgaaccg
attattgtaccttcccaagatatcgtattgggtctgtactacatgacccgcgaccgtatc
aatgccaaaggcgaaggcagcctgtttgccgatgtgaaagaagtgcatcgcgcataccat
accaaacaggtcgagctgggtacaaaaatcaccgtacgtctgcgcgaatgggtgaaaaac
gaagcaggtgagtttgagcctgtcgttaaccgttacgaaacaaccgtcggccgtgcattg
ttgagcgaaatcctgccgaaaggcctgccgtttgaatatgtcaacaaagcgttgaagaaa
aaagaaatttctaaactgattaacgcatcgttccgcctgtgcggcttgcgcgatacggtt
atctttgctgaccacctgatgtacaccggtttcggatttgcggcaaaaggcggtatttcc
attgccgttgacgatatggaaattccaaaagaaaaagcggccttgctggctgaagccaat
gccgaggttaaagaaatcgaagaccaataccgtcaaggtttggttaccaacggcgaacgc
tacaacaaggtggtcgatatttggggtcgtgccggcgataaaatcgctaaggcgatgatg
gacaacctgtccaaacaaaaagttatcgaccgtgccggcaacgaagtcgatcaagagtca
ttcaactccatctatatgatggcagactccggtgcccgtggttctgcggctcagattaaa
cagttgtcaggtatgcgcggtttgatggcgaaacctgacggctcgattattgaaacgccg
attacctcaaacttccgcgaaggtctgaccgtattgcaatactttattgcgacccacggt
gcgcgtaagggtttggcggataccgcattgaaaaccgcgaactccggttacctgacccgt
cgtctggtagacgtaactcaagatttggtcgttgttgaagacgattgcggtacttcagac
ggctttgttatgaaggcagtggtacaaggcggtgatgtgattgaagcattgcgcgatcgt
attttgggccgtgttactgcgtctgacgttgtcgatccgtcaagcggcgagaccttggtt
gaagccggtacgttgttgactgaaaaactggtggatatgattgaccaatccggtgtcgat
gaagtcaaagtccgtacgccgattacttgtaaaacccgccacggtttgtgcgcgcactgt
tatggtcgcgacttggcacgtggtaagctggtcaatgccggtgaggcagttggtgtgatt
gccgcccaatcaatcggcgaaccgggtacccagctgactatgcgtacgttccacatcggt
ggtgcggcatcccgtgcggcagcagccagccaagtggaagccaaatccaacggtacggca
cgattcagcagccaaatgcgttatgttgccaacaataaaggcgagttggttgtcatcggc
cgttcttgtgaagtcgtgattcacgacgatatcggccgtgaacgcgaacgccacaaagta
ccttacggtgccatcctgctggtacaagacggtatggccattaaagccggtcaaaccttg
gcaacctgggatccgcatacccgtccgatgatcaccgaacatgcaggtatggtgaaattt
gagaacgtggaagagggtgttaccgttgcgaaacaaactgacgatgtaaccggtttgtcc
actttggtggtgattgacggtaaacgccgttccagcagcgcgtccaaactgctgcgtccg
actgtaaaattgttggatgaaaacggcgtggaaatctgtattcccggtacgtccactccg
gtttcgatggcattccccgttggtgcggtgattaccgtacgcgaaggtcaggaaatcggt
aaaggcgacgtattggcgcgtatcccgcaagcctcttccaaaacccgcgacattaccggt
ggtctgccgcgcgttgccgaattgtttgaagcacgcgtgccgaaagatgccggtatgttg
gcggaaattaccggtaccgtttccttcggcaaagagaccaaaggcaagcaacgtctgatt
gttactgacgtggacggtgtagcatacgagaccttgatttccaaagagaaacaaattctg
gtacacgacggtcaagtggtaaaccgcggtgaaaccatcgtggacggagctgttgatccg
catgatattctgcgtttgcaaggtatcgaagcactggcacgctacattgtccaagaggtg
caagaggtttaccgtctgcaaggtgtgaagatttctgataaacacatcgaagtcatcatc
cgtcaaatgttgcgccgtgtgaacattgcggatgccggcgaaaccgggttcattaccgga
gagcaggtcgaacgcggcgatgtgatggcggccaatgaaaaagctttggaagaaggcaaa
gagccggcacgttacgaaaacgtattgctgggtattaccaaagcctccctgtccaccgac
agtttcatttctgccgcatcgttccaagaaacgacccgtgttctgaccgaagccgcgatt
atgggcaaacaagacgaactgcgcggtttaaaagagaacgtcatcgtcggccgcctgatt
cctgccggtaccggtttgacttaccaccgcagccgtcatcaacaatggcaagaggtggaa
caggagactgctgaaacccaagtaacggatgaataa
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