Nitrosopumilus maritimus: Nmar_0682
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Entry
Nmar_0682 CDS
T00626
Name
(GenBank) Collagen triple helix repeat
Organism
nmr
Nitrosopumilus maritimus
Brite
Glycosaminoglycan binding proteins [BR:
nmr00536
]
Heparan sulfate/Haparin
Extracellular matrix molecules (General comment) Storage depot, cell adhesion and motility, ECM/barrier formation
Nmar_0682
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-ProteinID:
ABX12578
UniProt:
A9A489
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Position
621596..623224
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AA seq
542 aa
AA seq
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MSSQSRLEIQGQAPFKQSGVYEAQIAIVGSRPSDAQIKSKQFTSLWRGNFHLRVKDGVFS
ETIGSPENPIPSSVLELETIWIVVTDLFSSLHSVFDVPLSKPKSSPKPPESKPSETKSNL
ETPKQTRSTKSTQSTPGVRGSPGEKGAPGLQGPTGDKGPQGPPGPTGPPGDKGPDGPQGP
PGDKGPTGDKGPAGDKGIAGDKGITGDKGITGDKGDKGDKGIPGPVGDKGDKGATGPIGE
KGPTGLKGPIGEKGEKGPTGPPGDKGLSGLKGPPGEKGEKGPTGPPGDKGLTGPVGTPGE
KGPTGQAGVQGEKGIQGGPGPIGEKGPAGPVGDKGPIGPAGPLGDKGLSGPTGVPGDKGP
IGPPGPIGEKGPKGTEGPIGEKGPQGPQGPAGAKGLTGVPGPQGEKGEKGPTGPPGEKGL
TGPAGPPGEIGTVGPQGSQGERGPTGPSGEKGPQGPQGIQGPQGERGPTGPIGSIGEAGP
RGEQGPLGPAGPRGPPGPPGEKGPSGGMSSEQKALFKELLEILTEKNIISTEEQIKLMSY
LY
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgtctcaatctagattagaaatccaaggtcaggcaccattcaagcaatctggcgtc
tatgaggctcaaattgcaatcgttggcagccgaccttctgatgcacaaattaaatctaaa
caattcacatctctttggcgtggaaatttccatctacgagttaaagatggagtattttct
gaaacaattggttctcctgaaaacccaattccatcatctgtcttagaattagaaacaatt
tggatagttgtaactgatctgttttcatcactacattctgtatttgatgtcccattatca
aaaccaaaatcttccccaaaacctcctgaatcaaaaccttctgaaactaaatcaaatctt
gaaactccaaaacaaacacgttcaacaaaatcaactcaaagcactcctggcgtacgaggt
agccctggtgaaaaaggcgcacctggattacaaggtccaactggtgacaaaggtccacaa
ggtcctcccggcccaactggtcctcccggtgacaaaggtcctgacggtccacaaggtcct
cccggtgacaaaggtccaactggtgacaaaggccctgcaggtgacaaaggtattgctgga
gataaaggaattactggtgacaaaggaattactggagataaaggtgataaaggtgacaaa
ggaattcctggtcccgttggtgataaaggtgacaaaggagcaactggtccaatcggagaa
aaaggtccaactggattaaaaggcccaatcggtgaaaaaggagaaaaaggtccaactggt
cctcccggcgacaaaggattatctggattaaaaggtcctcccggtgaaaaaggagaaaaa
ggtccaactggtcctcccggcgataaaggtttaactggtcctgtcggaactcctggagaa
aaaggtccaaccggacaagcaggagttcaaggagaaaaaggaattcaaggtggtcctggt
ccaatcggagaaaaaggtccagcaggtccagttggtgacaaaggtccaatcggtccagca
ggtcctcttggcgacaaaggattatctggtccaaccggagttcctggtgacaaaggtcca
atcggtcctcctggtccaatcggagaaaaaggtcctaaaggaactgaaggtccaatcgga
gaaaaaggtccacaaggtccacaaggtccagctggtgctaaaggattaacaggcgttcct
ggtccacaaggtgaaaaaggagaaaaaggtccaacaggtccgcccggagaaaaaggatta
acaggtccagcaggtccacctggagaaattggtacagttggtccacaaggttctcaagga
gaacgcggtccaacaggtccatcaggagaaaaaggtccacaaggtccacaaggaattcaa
ggtccgcaaggagaacgcggcccaactggtccaatcggttctattggtgaagcaggtcct
cgtggagaacaaggcccattaggtccagcaggaccaagaggtccacccggtccaccaggc
gaaaaaggtccatcaggtggaatgtcttctgaacaaaaagcattgttcaaagaattgcta
gaaatactaactgagaaaaatatcattagcactgaagaacaaatcaaactaatgagttat
ctttactag
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