Nitrosopumilus maritimus: Nmar_1198
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Entry
Nmar_1198 CDS
T00626
Name
(GenBank) tRNA pseudouridine synthase D TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
nmr
Nitrosopumilus maritimus
Brite
KEGG Orthology (KO) [BR:
nmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nmr03016
]
Nmar_1198
Enzymes [BR:
nmr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
Nmar_1198
Transfer RNA biogenesis [BR:
nmr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Nmar_1198
Prokaryotic type
Nmar_1198
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruD
bDLD1
Motif
Other DBs
NCBI-ProteinID:
ABX13094
UniProt:
A9A5T9
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All DBs
Position
complement(1092421..1093617)
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AA seq
398 aa
AA seq
DB search
MIPDLDSKIGISVYSTKFDGIGGKIRTTPEDFEVSEKILEKTLNSINQEEGYAVYKLKKK
RIDTNHALSDIFRKKGLRLKSLGLKDASAITEQFVCSGNKGKSIEDYSTEKYSLKKIGFV
KKPLSKKDMIGNHFKIKISDCTNKLSSFEEFNNVLNFYGYQRFGSKRPVTHLIGKAILQR
DFDKAVELVLSFTSDYDSKENNEIRQKLVDKQNYNQYFEKIPKQMDIERIVLKEMIEHDD
AFRAIRAIPVSLRRFYIQAYQSFIFNKSLSTAFTDGENMFESESGDVCFDFNGIIGKFVK
GLDQKLAIPFVGYSYYKKTRFDYHISQIMQQEEITPKDFFIKEMQEVSSEGGFRQAAIDC
SDYSSRDDVVEFTLSRGSFATILLREIMKPSDPIYAGF
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
gtgatacctgatttagattctaaaataggaatttctgtttatagtacaaaatttgacgga
attgggggaaaaattcgtactactcctgaagactttgaagtctctgaaaaaattttagaa
aaaactctgaattcaattaatcaagaagaaggatatgctgtttacaaattaaaaaagaaa
agaattgatacaaatcatgcactatctgatatttttagaaagaaaggtcttagactaaag
tctcttggattaaaggatgcatctgcaatcactgaacagtttgtttgttctggaaataaa
ggtaaatcaattgaagattattcaactgaaaaatattctttgaaaaaaattggctttgta
aaaaaacctctttcaaaaaaagatatgattgggaatcattttaaaatcaaaatctctgat
tgtaccaataaactatcttcatttgaagagtttaacaatgtcttgaatttctatgggtat
caaagatttggctcaaagaggcctgtaactcatttgataggtaaagcaatacttcaaaga
gattttgataaagcagttgaacttgttttgtcttttacttctgattatgattcaaaagaa
aataatgaaattcgacaaaaacttgttgataaacaaaactacaatcaatattttgagaaa
ataccaaaacaaatggatattgaaagaattgtcctaaaagaaatgattgaacatgatgat
gcatttcgtgcaatacgtgcaattcccgtatctttgagaagattttacattcaggcatac
cagtcgtttattttcaataaatctctgagtactgcatttactgatggtgaaaatatgttt
gaatctgaatctggtgatgtttgttttgattttaatggaatcattggaaaatttgtaaag
ggattagatcaaaaattggctataccttttgttggatattcatattacaaaaaaacaaga
tttgattatcatatatcacaaataatgcagcaagaagaaataactcccaaagacttcttt
atcaaagagatgcaagaagtaagcagtgagggaggatttcgacaagctgcaatagattgt
tctgattactcgtctcgtgatgatgttgtagaatttactttgtcaaggggatcttttgca
acaattttgttgagagagattatgaaaccatctgatcctatttatgctggtttttga
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