Nitrosospira multiformis: Nmul_A0760
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Entry
Nmul_A0760 CDS
T00302
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
nmu
Nitrosospira multiformis
Pathway
nmu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nmu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Nmul_A0760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nmu03021
]
Nmul_A0760
03400 DNA repair and recombination proteins [BR:
nmu03400
]
Nmul_A0760
Enzymes [BR:
nmu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Nmul_A0760
Transcription machinery [BR:
nmu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Nmul_A0760
DNA repair and recombination proteins [BR:
nmu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Nmul_A0760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Biotin_lipoyl_2
RPOC_hybrid
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
ABB74067
UniProt:
Q2YB04
LinkDB
All DBs
Position
884561..888787
Genome browser
AA seq
1408 aa
AA seq
DB search
MKALLDLFKQVTQKEEFDSIKIGLASPEKIRSWSYGEVKKPETINYRTFKPERDGLFCAK
IFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTLSKVRRERMGHIELASPVAHIWFLKSL
PSRLGMVLDMTLRDIERVLYFEAYVVTDPGLTPLQRCQLLTDDDYRAKTEEYGDDFRASM
GAEGIRDLLNTLNIRVEIDDLRREMGTTGSETKMKKISKRLKVLEAFSKSGIKPEWMILA
VLPVLPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELKAPEIIVRNEKRMLQ
EAVDSLLDNGRRGKAMTGANKRPLKSLADMIKGKGGRFRQNLLGKRVDYSGRSVIVVGPQ
LKLHQCGLPKKMALELFKPFIFNKLEIMGIASTIKAAKREVENESPIVWDILEDVIREHP
VMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQMEC
RTLMMSTNNVLSPANGEPIIVPSQDIVLGLYYTTREKVNARGEGMYFANISEVSRAYENR
VIELNARIFVRIREYELADGERREKITRYETTVGRALLSEILPAGLPFPLINKVLKKKEI
SKLINASFRRCGLRETVIFADKLMYAGFSYATRAGISICLDDMLTPAQKDAIISASEKEV
QEIELQYTSGLVTQGERYNKVVDIWGRAGDQVAKAMMDQLGVEPIIDPETGTAKTGESGK
PLIQESFNSIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQY
FISTHGARKGLADTALKTANSGYLTRRLVDVTQDLVVTQEDCGTSNGVVMKALVEGGEVI
EALRERILGRVVANDIINPEHQAVIYPAGMLLDENAVDTIEMLGIDEVKVRTPLTCETRY
GLCAKCYGRDLGRGTPVNVGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRTAVASQVES
KSNGIVRYSPTMRYVTNARNELIAISRSGEVVIQDDNGRERERHKAPYGATLLIRDGEVV
KAGQVLAAWDPHTRPIITEYSGKVRFENVEEGVTVAKQIDEVTGLSTLVVIDPKRRGVVQ
TKGLRPVVKLLDEEGKEVRLAGSNLPVHITFQVGSIITVRDGQQVSVGEVLARIPQESSK
TRDITGGLPRVAELFEARSPKDAGVLAEVTGIVSFGKDTKGKQRLVITDLDGVSHEYLIP
KDKHVTAHDGQVVNKGESIVDGPADPHDILRLLGVEALARYITDEVQDVYRLQGVKINDK
HIEVIVRQMLRRVQIVDSGDTRFIPGEQVERAEMLAENEQVELEGKRPATYEYMLLGITK
ASLSTDSFISAASFQETTRVLTEAAIMGKKDDLRGLKENVIVGRLIPAGTGLTFHNTRKR
QRLMLDTGEAPPLSEEETGEIRNSGYAV
NT seq
4227 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcactgcttgatttattcaaacaggttacccagaaagaagagttcgattctatc
aagatcgggctggcttctcccgagaaaatacgttcctggtcctatggtgaggtgaagaag
ccggaaaccatcaattatcgtacgttcaagcccgagcgagacggcttgttctgcgcaaaa
atcttcggtcccgtaaaggattacgagtgtctttgcgggaaatacaagcgtttgaagcat
cgcggcgtgatctgcgagaaatgcggtgtcgaggtcacgttatccaaagtgcggcgcgaa
cgcatgggccatatcgaactggcatccccggtggcgcacatctggttcctgaaatcattg
ccatcccgattggggatggtgctggatatgactttgcgcgacatagagcgggtgctctat
ttcgaggcgtatgtagtaacggatccgggactgacgcctctccagcgatgccagttgctg
acggatgacgattacagggccaaaaccgaagaatacggggatgatttccgcgccagcatg
ggtgcggaaggtattcgtgatctattgaataccctgaatattcgtgtggaaatcgatgat
cttcgccgcgaaatgggaacgaccggctccgaaacgaagatgaagaagatttccaagcgt
ctgaaagtgttggaggcattcagcaaatccggtatcaaaccggagtggatgatcctggcc
gtgctgcccgtactgccccccgaactgcgcccactggtgccgctggatggaggacgtttt
gcaacttccgatctcaacgatttgtatcgccgcgtcatcaaccgcaataaccggttgaaa
cgcttgctcgaactgaaggcaccggaaattattgtgcgcaacgagaagcgcatgctgcag
gaagcagtggattcactactggataacggccgtcgtggtaaagccatgacgggcgccaac
aaacgcccgttgaaatcgcttgcggatatgatcaagggcaagggcgggcgttttcgccag
aacctgcttggaaaacgcgtggattattccggacggtcggtcatcgtggtgggaccgcag
ctcaagctgcaccagtgcggtttacccaagaaaatggccctggaattattcaaacccttt
atcttcaacaagctggagataatgggtatcgccagcaccataaaggctgcgaaacgtgag
gtcgaaaacgaaagtccgatcgtgtgggacattctggaagatgtcattcgcgagcaccct
gtaatgctgaaccgggcgccaactctgcaccggctgggtattcaggcgtttgagccggtc
ctgatagaaggcaaagctatccaactgcatccgttggtatgcgccgcattcaatgcggac
tttgacggcgaccagatggcagtccatgtaccgctttcgctggaagcgcaaatggagtgc
cgcacgctgatgatgtcgaccaacaacgtcttgtcgcccgctaacggcgaacctattatc
gtgccgtcacaggacatcgtgctgggactgtactacaccacgcgcgagaaggttaatgcg
cggggcgagggtatgtatttcgccaatatcagcgaagtttcccgtgcctacgagaatcgc
gttatcgagctgaatgcccggattttcgtaaggatccgcgaatacgagcttgcggacgga
gagcggcgcgagaagatcacgcgttatgaaaccacggtaggacgcgcattattgtcggag
attctccctgccgggctgcctttcccgctgatcaacaaggtactcaagaaaaaagaaatc
tccaagctcatcaatgcaagcttccgtcgttgtggcctgcgcgaaaccgtgatttttgcc
gataagctgatgtatgccggtttcagctatgcgactcgggctgggatttcgatttgcctg
gatgatatgcttacccccgcgcagaaggatgcgatcatcagtgcctccgagaaggaagtg
caggagatcgagcttcagtatacgtccggtcttgtcacccagggcgaacgttacaacaag
gtcgtggacatatggggccgcgcaggcgaccaggttgccaaggcgatgatggatcagctc
ggggtcgagccgatcatcgatccggaaaccggaactgctaaaacgggcgagtcaggaaaa
cccttgattcaggaatcgttcaattccatctatatgatggcggattcgggggcccgcggt
tctgctgcccagatccgtcagttggcaggtatgcgcgggctgatggccaagccggatggg
tcaatcatcgagacgcccatcacggctaatttccgcgagggattgaacgttctgcagtac
tttatttccactcacggtgcgcgcaagggtctggccgatacggcgctgaagacggccaat
tcaggctatcttacccgccggcttgtcgatgtgacgcaggatctggttgtaacccaggag
gactgtggcaccagcaacggcgtggtgatgaaggcattggtcgaaggtggcgaagtcatc
gaagcgttgcgcgagcgcattctcggccgtgtggtggccaacgatattatcaatcccgag
catcaggcggtgatttatccggcaggtatgctgttggatgaaaatgcagtggataccatc
gagatgctgggtatagatgaagtgaaggttcgcactccgcttacctgtgaaacccgctat
ggtctatgtgccaaatgttatggacgcgatctggggcgcggtacgccggtcaatgttggc
gaagcggtgggagtgatcgctgcccagtcgatcggggagccgggtacccaattgaccatg
cgtactttccatatcgggggggcggcttcccgaactgcggtcgcaagccaggtcgagagc
aaatccaacggtatcgtgcggtattcaccgactatgcgctatgtgaccaatgcacgtaac
gaattgatcgcgatttcccgcagcggcgaagtcgtgattcaggatgataacgggcgtgag
cgggaacggcacaaggcgccgtacggtgcgaccttgctgattcgtgacggagaagtcgtg
aaagcgggacaggtactggcggcatgggatccgcatacgcgtccaatcatcactgaatac
tctggcaaggtccgcttcgagaacgtggaagaaggtgtgacggtggccaagcagatagat
gaggttaccggtttgtccacgctggtggtgatcgatccgaagcgccggggagtggtgcaa
acgaagggattgcgtccggtggtgaaacttctggatgaagagggcaaggaagtgcggctg
gctggcagtaatttgccggttcacatcaccttccaggtaggctccatcatcactgttcgg
gacgggcagcaggtcagcgtgggtgaggttctcgcgcgtattccacaggaaagctcgaaa
acgcgggacattaccggtggcttgccgcgcgttgcggaattgtttgaagcgcgttcccct
aaggatgcgggcgtactggcagaagttaccggaatcgtatccttcggcaaggataccaag
ggcaagcaacggctggtcattaccgatctggatggagtgtcgcacgaatatctgattcca
aaggacaagcacgtgactgcccatgatgggcaggtggtgaacaaaggagaaagtatcgtc
gacggccctgctgatccacatgatattctccgtctgctgggggtggaagcgctggcgcgc
tatatcactgacgaggtgcaggatgtgtatcgcctgcagggcgtcaagatcaacgacaag
cacatcgaggtgatagtgcgtcagatgctgcgccgtgtgcagatcgtggattccggcgat
acgcgcttcattccgggcgaacaggttgaacgcgccgaaatgcttgcggaaaacgaacag
gttgaactagagggcaagaggccggcaacctatgaatatatgctgctggggatcaccaag
gcttcgctgtcaaccgactcgttcatttcggcggcatcgttccaggagactacacgggtg
ctgaccgaagcggctatcatgggcaagaaggatgatctgcgcgggctgaaagaaaacgtt
attgtgggacgccttattcccgcaggtacgggtttgacctttcacaatacgcgcaagagg
cagcgcctcatgctggataccggggaagcacctcctttgagtgaggaagagacaggagaa
attagaaacagtggatacgctgtctga
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integrated database retrieval system
