Nipponia nippon (crested ibis): 104013877
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Entry
104013877 CDS
T05756
Symbol
TRIM71
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
nni
Nipponia nippon (crested ibis)
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nni03019
]
104013877 (TRIM71)
04121 Ubiquitin system [BR:
nni04121
]
104013877 (TRIM71)
Enzymes [BR:
nni01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104013877 (TRIM71)
Messenger RNA biogenesis [BR:
nni03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104013877 (TRIM71)
Ubiquitin system [BR:
nni04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
104013877 (TRIM71)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
Filamin
DUF5128
SGL
Motif
Other DBs
NCBI-GeneID:
104013877
NCBI-ProteinID:
XP_009464696
LinkDB
All DBs
Position
Unknown
AA seq
566 aa
AA seq
DB search
MGRHVGHSFIYLQDALQDSRTLTIQLLADAQQGRQAIQLSIEQAQAVAEQVEMKAKVVQS
EVKAVTTRHKKALTCICCAFLSPPKVEKIRQVKAKSLYLQVEKLRQNLNKLDNTISAVQX
EEGRTMDILLARDRMLAQVQELKNVRGLLQPQEDDRIMFTPPDQALYMAIKSMGFVSSGA
FAPLTKATGEGLKRALQGKVASFTVIGYDHDGEPRLSGGDMISAVVMGPDGNLFGADVSD
QQNGTYLVSYRPQLEGEHLVSVMMCNQHIENSPFKVVVKSGRSYIGIGLPGLSFGSEGDS
DGKLCRPWGVSVDKEGYIIVADRSNNRIQVFKPCGTFHHKFGTLGSRPGQFDRPAGVACD
VSRRIIVADKDNHRIQIFTFEGQFILKFGEKGTKNGQFNYPWDVAVNAEGKILVSDTRNH
RVQLFGPDGVFLNKYGFEGALWKHFDSPRGVTFNHEGHLVVTDFNNHRLLVIHPDCQSAR
FLGSEGTGNGQFLRPQGVAVDQEGRIIVADSRNHRVQIFESNGSFLCKFGTQGSGFGQMD
RPSGIAVTPDGMIVVVDFGNNRILVF
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgggacgacatgtgggtcacagctttatctacctccaagatgccctccaggactccagg
actctcaccattcagctgctggcagatgctcagcaaggacgacaggctattcaactgagt
attgaacaggcccaggctgtggcagagcaggttgagatgaaagcgaaggtggtacagtct
gaagtcaaagcagtgactacgagacataagaaggccttgacttgcatttgttgtgctttt
ctgtccccccccaaggtggaaaagattcgtcaagtcaaggctaagtcactgtacttgcaa
gttgaaaagttacgtcagaacctaaacaagctggacaacaccattagtgctgttcagnca
gaggagggtcgtaccatggatattcttctggctcgggaccgcatgctggctcaggtgcag
gagctgaagaatgtgagaggccttctccagccacaggaagatgacaggatcatgttcact
ccccctgaccaggcattgtatatggccattaaatcaatgggctttgtcagcagtggggct
tttgctcctttgaccaaagccactggggaaggcctcaagcgtgcactgcagggcaaagtg
gcctctttcacagtgataggctatgaccatgatggtgagcctcgcctttcaggaggtgac
atgatctctgctgtggtgatgggcccggatggaaaccttttcggggcagacgtcagtgat
cagcagaatgggacctacctggtcagctaccgtccacagctagagggagagcacctggta
tccgtgatgatgtgcaaccaacacattgagaacagccccttcaaggttgtggtgaaatct
gggcgcagctacataggcattgggctgccggggctctccttcggcagtgagggagacagc
gacggcaaactctgccgcccctggggggttagcgtagacaaagaaggctacatcattgtt
gctgaccgcagtaataaccgcatccaggtgttcaaaccatgcgggaccttccatcacaag
tttggcacgctgggctcccggccgggccagttcgatcgccctgccggcgtggcctgtgac
gtctcacgcaggatcatcgtggctgacaaggacaatcatcgcatccagatcttcacattt
gaggggcagttcattctgaagtttggggagaaaggaacaaagaacgggcaattcaattac
ccatgggatgtggccgtcaacgcagagggcaagatcctggtttctgacacaaggaaccat
cgtgttcagctgtttgggcccgacggcgtgtttctcaacaagtatggcttcgaaggggca
ctctggaagcactttgattcccccagaggtgtgactttcaatcacgagggccacttggta
gtgacagacttcaacaaccatcgccttctggtcatccatccagattgccagtcagcacgc
tttctgggctcggagggcaccgggaacggccagttcctgcgcccgcagggagtggcggtg
gatcaagaggggcgcatcatcgtggccgattccaggaaccaccgggtgcagatatttgag
tcaaatggtagctttttatgcaagttcggcactcagggaagcggctttggtcagatggac
cgtccttcaggtatagccgtcacccctgatggcatgattgttgtggtcgactttggaaac
aatcgaattctcgtcttctaa
DBGET
integrated database retrieval system
