Nocardia nova: NONO_c23290
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Entry
NONO_c23290 CDS
T03032
Name
(GenBank) putative DNA polymerase III subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
nno
Nocardia nova
Pathway
nno03030
DNA replication
nno03430
Mismatch repair
nno03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nno00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NONO_c23290
03430 Mismatch repair
NONO_c23290
03440 Homologous recombination
NONO_c23290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nno03032
]
NONO_c23290
03400 DNA repair and recombination proteins [BR:
nno03400
]
NONO_c23290
Enzymes [BR:
nno01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NONO_c23290
DNA replication proteins [BR:
nno03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NONO_c23290
DNA repair and recombination proteins [BR:
nno03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NONO_c23290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
UVR
GIY-YIG
RNase_H_2
DEDDh_C
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AHH17125
UniProt:
W5TCR9
LinkDB
All DBs
Position
complement(2541173..2543029)
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AA seq
618 aa
AA seq
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MSDLAPTLLAVPTPPPRSAQLALELPGHGGEDEERELREITFVVVDLETTGTKPGADAIT
EIGAVKVRGGEILGEFATLVDPGRAIPPQIVQITGITTAMVLRAPRIEAVLPGFLEFASG
TVLVAHNARFDMSFLKAAALQCDAEWPDFPVLCTVQLARRILDRDEAPTVRLSALAQLLG
ASTRPTHRALDDARATVDVLHALFERVGNLGVQTLPELVDYLPEVTRRRRAKRVLAADLP
AAPGVYLFRGPSDEVLYIGTAVNLRRRVRNYFTGSETRTRMREMVTLATRVDHVRCAHGL
EAGVRELRLLVAHTPPYNRRSKFPQRAWWLTLTDEPFPRFAVGRTPTAYALGPFGSRAAA
AEVGATVAEYSGLRTCTTRIPRGGVHGAQCPPAAVGGCPATVFGERAPAADYAAAPARVR
DLFTGRDDAPLRAITDRIDEYVRAEHFEAAARLRDRTCVVVRALHRTQRLTALARIAELI
AARPDGSGGWDFAVVRYGRLAAAGTAVRGVAPMPVVDGLVAAAETVRPARLATDQPRLPT
GTDEFDSPDHPPLRGAPPEETAVIARWLDQPGTRIVRTTDGYREPRLGAGPWLSWAERAE
NAAQAESVAGEYLSRTSA
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggacctcgcgcctacgctgctcgccgtgcccactcctccaccgcgatcggcccag
ctggccctcgaattacccggtcacggcggtgaggacgaggagcgggaactgcgggagatc
accttcgtcgtggtcgatctcgagaccaccggcaccaaacccggcgccgacgcgatcacc
gagatcggcgcggtgaaggtgcgcggcggcgaaatcctcggtgaattcgccacactcgtc
gatcccggccgggccatcccgccgcagatcgtgcagatcacgggcatcacgaccgcgatg
gtgctgcgggctccccggatcgaggcggtgctaccgggattcctcgaattcgcttccggc
acggtgctcgtcgcgcacaatgcccgcttcgacatgtccttcctgaaggccgccgcgctc
cagtgcgatgccgaatggccggatttcccggtcctgtgcacggtgcagctcgcgcgccgc
atcctcgatcgggacgaggcgccgacggtgcggctgtcggcgctggcgcaactgctcggc
gcctccacccggcccacccaccgcgccctcgacgatgcgcgcgcgaccgtcgacgtgctg
cacgcgctgttcgaacgggtcgggaatctgggggtgcagacgctgccggaactggtcgac
tatctgccggaggtcacgcggcgtcggcgggccaaacgggtactggccgccgatcttccg
gcggcgccgggggtgtacctgttccgcgggccgtccgacgaggtcctctacatcgggacc
gcggtgaatctgcgccgccgggtgcgcaactacttcaccggttccgagacccgcacccgc
atgcgcgagatggtcacgctcgccacccgggtcgatcacgtgcggtgcgcgcacgggctc
gaggccggtgttcgcgagctgcggctgctggtggcccacacgccgccctacaaccggcgg
tccaaattcccccagcgcgcctggtggctgacgctgaccgacgaacccttcccccgcttc
gcggtcggccgcacccccaccgcatatgccctgggccccttcggttcccgggccgccgcg
gccgaggtgggggcgaccgtcgcggaatacagcggactacgcacctgcacgacgcggatc
ccgcgcggcggggtgcacggcgcccagtgcccgcccgcggcggtcggcggatgtcccgcg
accgtcttcggcgagcgggccccggcggccgactacgcggccgcaccggcacgagtgcgg
gatctgttcaccggtcgtgacgacgcaccgctgcgggcgatcaccgaccgcatcgacgaa
tatgtccgcgcagagcatttcgaggccgccgcgcggttgcgcgaccggacctgcgtcgtg
gtgcgggcactgcaccgcacccagcggctcaccgcactggcccgcatcgccgaactgatc
gccgcgcgaccggacggcagcggcggctgggatttcgcggtcgtccgatacgggcgcctg
gcggccgccggtaccgccgtacgcggtgtcgcccccatgccggtggtcgacgggctggtc
gccgccgccgagaccgtccgcccggcccggctcgccaccgatcagccccgattacccacc
ggcaccgacgaattcgactcccccgaccatcccccgctgcgcggcgccccacccgaggag
acagctgtcatcgcccgctggctggaccagccgggcacccgcatcgtgcgaaccaccgac
ggctaccgtgaaccccgcttgggcgcgggcccctggttgtcctgggccgaacgcgccgag
aacgcggcgcaggccgaatccgtcgcgggcgaatacttgtcgcggaccagcgcctga
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