Nelumbo nucifera (sacred lotus): 104590928
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Entry
104590928 CDS
T04131
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
nnu
Nelumbo nucifera (sacred lotus)
Pathway
nnu03030
DNA replication
nnu03410
Base excision repair
nnu03420
Nucleotide excision repair
nnu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
104590928
03410 Base excision repair
104590928
03420 Nucleotide excision repair
104590928
03430 Mismatch repair
104590928
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nnu03032
]
104590928
03400 DNA repair and recombination proteins [BR:
nnu03400
]
104590928
DNA replication proteins [BR:
nnu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
104590928
DNA repair and recombination proteins [BR:
nnu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
104590928
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
AAA_22
Rad17
DNA_pol3_delta
AAA_30
PTCB-BRCT
AAA_19
AAA_18
AAA_assoc_2
nSTAND3
AAA_5
BRCT_2
RuvB_N
AAA_14
Sigma54_activ_2
Gp44_lid
Zeta_toxin
NTPase_1
RNA_helicase
AAA_17
AAA_16
SurA_N
AAA_24
Motif
Other DBs
NCBI-GeneID:
104590928
NCBI-ProteinID:
XP_010248008
UniProt:
A0A1U7Z6K3
LinkDB
All DBs
Position
Un
AA seq
975 aa
AA seq
DB search
MQSDIRKWFMKKHDKGNGNAAKPEKPNTATSQPETSPPAAASPDKPVHESGEGSGRRKTS
KYFATDSQKPKDEKEIECTPAKRKTEKSREELNCDVKPPSAKRVHKGDEDEDFVLPSLKK
NSAKDTPTKKLKSGSGKGIAQKSVDSDESDEEVPDDKTVKSPFKAAGRGAGGRGAAAAPA
GGRGRGGGRGGFMNFGERKDPPHKGEKEIPEGAPDCLAGLTFVISGTLDSLEREEAEDLI
KRHGGRVTGSVSKKTNYLLADEDIGGRKSTKAKELGTAFLTEDGLFDLIRASKPAKPPVR
EEPKKKTADKAVESLPKRSPKKVERKDQGGSALARKVGPTNSASGVSLAKQNGQTVGHSL
TWTEKYRPKLPNDIIGNQSLVKQLHDWLANWNEQFLHTAKKGKGKKQNDGGAKKAVLISG
TPGIGKTTSAKVVSQMLGFQAIEVNASDNRGKADAKIFKGIGGSTANSVKELVSNEALSA
NLDRSKHSKTVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLVNY
CLVLTFRKPTKQQMAKRLLQIANNEGLQVNEIALEELAERVNGDMRMALNQLQYMSLSMS
VIKYDDIRNRLLNSAKDEDISPFTAVDKLFGFNGGKLRMDERIDLSMSDPDLVPLIIQEN
YINYVPSFAGKDDNGIKRMNLLARAAESIADGDIINVQIRRYRQWQLSQTSSFASCIIPA
ALLHGRRETLEQGERNFNRFGGWLGKNSTVGKNLRLLEDVHAHLLASREYNSDRETLRVD
YFTLLLKRLTEPLQTLSKDEAVQNVVELMDAYSINQDDFDTIVELSKFQGHRNPLDGIPP
AVKAALTKAYKQGSSLRVVRSADLITLPGIKKAPKKRVAAMLEPVEDTLAEEDDDALAES
EEENSSDTEDMENIDKQLKMDFQSNSSKGIQVKLDLKNTGNSNAKKTPANNSKESSQSGQ
KKGGRGSGAAAKRKR
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcggatatccggaagtggttcatgaaaaaacatgacaagggcaatggaaatgca
gctaagcccgagaagcctaatacagccacctcacagcctgaaacttctcctccagctgca
gcttcaccagataaacctgtacatgaaagtggagaaggttcaggaagaaggaaaactagc
aaatattttgctactgattcccagaagccaaaagatgaaaaagagatagagtgcactcca
gctaaaagaaagactgagaagagtagggaggaattgaattgtgatgtgaaacccccatct
gcaaagagagttcataagggtgatgaggatgaggactttgtcttgcccagcttgaagaaa
aactcagccaaggacactccaaccaagaaactgaagagtgggtcaggcaagggtattgct
cagaaatctgtggatagtgatgagagtgatgaagaggtccctgatgataaaactgtcaag
tctccttttaaggctgctggaaggggtgctggtggaagaggtgcagcagcagcaccagct
ggtggaagagggagaggtggtggtaggggtggattcatgaattttggtgaaaggaaagat
cctccacacaagggagaaaaggaaattccagagggtgctcctgattgtttagctggtctg
acttttgtgatcagtgggactcttgacagtttggaaagggaagaagcagaagacttaatt
aagcggcatggtgggcgtgttactggatctgtcagcaaaaaaacgaattatcttcttgct
gatgaagatattggtgggcggaaatccacaaaagctaaagagctgggtactgccttttta
accgaggatggattgtttgacttgatccgtgcatcaaaacctgcaaaaccacctgtgcga
gaggaaccaaagaagaaaactgcagataaggctgtggaatcactgccaaagagaagtcct
aagaaagtagaaagaaaggatcaaggaggcagtgctttggcaagaaaggttggtccaacc
aattctgcttcaggtgtttctctagctaagcagaatggccaaactgttggacattcactg
acatggacagagaagtataggccaaagcttccaaatgatattattggcaatcagtcactt
gttaagcagcttcatgactggttggccaattggaatgaacaattccttcacactgcgaaa
aaagggaaagggaagaagcagaatgatggtggagctaagaaggctgtactaataagtgga
acacctggaatagggaagactacgtcagcaaaggttgtcagccagatgctggggttccaa
gcaattgaggttaatgctagtgataatcgtggaaaggctgatgccaaaattttcaaagga
attggtggaagcacggctaattccgtaaaggaacttgttagtaatgaagctctgagtgct
aatttggatcggtcaaagcattctaaaactgtgctaattatggatgaggttgatggtatg
tccgctggagatagaggtggtgtggctgatcttatcgctagcatcaagatatccaagatt
cctatcatctgtatctgtaatgatcgctacagtcagaaactaaaaagccttgtcaactat
tgtttggtccttactttccggaaaccgacaaaacaacagatggcaaagaggttattgcaa
attgcaaacaacgaaggacttcaagttaatgagattgcacttgaagaacttgcagagaga
gttaatggagatatgcgaatggcactaaatcagttgcagtatatgagcctctcaatgtct
gttatcaaatatgatgacataagaaaccgtcttcttaacagtgcaaaggatgaagacatt
tcaccctttactgctgttgataagctatttggttttaatggggggaagttgagaatggat
gagagaattgacttgagcatgagcgatcctgatctagtccctcttattattcaggaaaat
tacatcaattatgtacctagctttgctggtaaggatgataacgggatcaaaagaatgaac
ttacttgcacgtgctgcagagtctattgcagatggcgatataatcaatgttcaaattaga
agatatcgacagtggcaactatcccaaactagctcgtttgcatcttgcataatccctgct
gctttgctgcatgggagaagagagacccttgaacagggggagcgcaattttaatagattt
ggtgggtggcttggaaagaactctacagtgggaaaaaatttgaggcttttggaagatgtg
catgctcatcttcttgcttctcgtgaatacaattctgatagggaaaccttgcgagttgat
tacttcactcttcttctgaaacgattaactgagcctcttcagacactctctaaggatgaa
gcagttcagaatgttgttgagttgatggatgcttactctataaatcaggacgactttgac
acaatcgtggagttatcaaagttccagggacaccgaaacccattagatggcataccacct
gctgtcaaagctgcattgacaaaggcatacaagcaaggaagtagcttgcgcgtggtacga
tcagctgacttgatcacacttcctggaattaagaaggccccaaagaagcgtgtagcagca
atgttagagccagtggaagatactttggcagaggaggacgatgatgcactagcagaaagt
gaagaagagaactcttcagatacagaggatatggaaaatattgataaacaacttaagatg
gattttcagagcaacagctcgaaaggaattcaagtcaaattggacttgaaaaacacggga
aattctaatgcaaagaagacaccagcgaataactcgaaggaaagctctcaatctggacag
aagaaagggggacggggttctggagcagcagccaagagaaaaagatag
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