KEGG   Nelumbo nucifera (sacred lotus): 104594841
Entry
104594841         CDS       T04131                                 
Name
(RefSeq) zinc finger CCCH domain-containing protein 24
  KO
K15332  tRNA (uracil-5-)-methyltransferase [EC:2.1.1.-]
Organism
nnu  Nelumbo nucifera (sacred lotus)
Brite
KEGG Orthology (KO) [BR:nnu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:nnu03016]
    104594841
Transfer RNA biogenesis [BR:nnu03016]
 Eukaryotic type
  tRNA modification factors
   Methyltransferases
    104594841
SSDB
Motif
Pfam: tRNA_U5-meth_tr Methyltransf_31 Methyltransf_25 zf-CCCH Methyltransf_4 MTS RRM_1 Methyltransf_15 Ubie_methyltran Methyltransf_11 Methyltransf_32 PCMT Ish1 PrmA zf-CCCH_2 Torus AviRa zf_CCCH_4
Other DBs
NCBI-GeneID: 104594841
NCBI-ProteinID: XP_010253648
UniProt: A0A1U7ZYC3
LinkDB
Position
Un
AA seq 872 aa
MADSPGNNASAAETLNPSLEEIKPLNTESTNDAEPFEQLQQENLVEAGEATAADEEVQPS
SSQSIEGQESAGKRKREDIEEENEGTKSSLHPLWKTSLCSYFRRQSGHCSHGDACRYAHG
EEELRPRPDNSWDPTSERAKKLLKTENEEKNETSDAEVNVLMTDAFVDSSDPARDKCVVH
LPRKWASDNLKSYLDEQGILYKTAKKKKGMTVGFVSFENTEQVKNAIEILGGKTIGNKQI
KVADVLPRSFEKKAKSTISVSEGTGQATEILLGTDDSSVSASINGCENNDTVEMDKLMGD
GLVAKARNACDVVTPLAHMSYADQLEHKKNSLMQTLKKLTRNARKACPEGIPLPEWILKS
RDIGGLPCKLEGILESPLVNGYRNKCEFSVGYSFMGKPTVGFMIGNFRDGVTAVEEPVDC
PNISKIACKFAAIFQEFLQHSSLPLWNRINNTGFWRQLTVREGRSPGETIEVAALESNIS
EVMLMIQVCSSGFDDELVTTEFERMAQSLALEAAESSPPLPLTVLVVQDHTGISNAAPVD
APLRTLSITKAETTSGPDANDITVEARIHDYISNLRFSISPTAFFQVNTLAAEKLYSLAG
DWAGLGPDTLLFDICCGTGTIGLTLAHRVGMVVGIEMNASAVSDAQRNAEINGIKNCRFI
CAKAEDVMGSLLKEYLNVPSKQDESPHVISEDNGKDDLRDLENLASVDNGADLEESRIHE
LGDDTSSSGCPNNGSEELEGPIERSCISEDTSKTVQQYKDVVAIVDPPRVGLHPVVIKAL
RTHPRLRRLVYISCNPESLVANAIELCTPSTNKPEKGNKNNRGWRKMSSAGLARHRTKSM
PSSEPFHPVKAMAVDLFPHTQHCEMVMLLERL
NT seq 2619 nt   +upstreamnt  +downstreamnt
atggcggattcacccgggaacaatgcctcggcagctgagactctgaacccgtctctcgaa
gagattaaaccattgaataccgagtcaacgaacgatgccgaacctttcgagcaactgcaa
caagaaaacctagtagaagcaggagaagcaacggcagccgatgaagaagtccaaccctcg
tcttctcaatcaatagaaggtcaggagtcggctgggaaacgaaagagagaagatatagaa
gaagagaatgagggaacaaaaagttcccttcatcccttgtggaagacgagcctttgttcg
tattttcgacgccaatctgggcattgcagccatggagacgcttgtcgctatgcccacggc
gaagaagagctgcggcctcggccggataactcatgggacccaacttcggagagggcgaag
aagctcttgaaaaccgaaaatgaggagaaaaacgaaacttccgatgcagaggttaatgtt
cttatgacggacgctttcgttgattcgtcggatcctgcccgtgataaatgcgtagtgcat
ctcccacgcaaatgggcctccgacaatttgaagagttatctcgacgagcagggaattctc
tataagacggctaagaagaagaagggtatgactgttggctttgtgagctttgaaaataca
gaacaagttaaaaatgcaattgagatacttggcggaaaaactatcggaaataagcaaata
aaggttgctgatgtccttccacggtcatttgagaaaaaagctaaatcgacaatctctgtc
tctgaaggaacagggcaagcaactgaaattttgttgggcaccgatgattctagtgtttct
gcctctataaatggttgtgagaataatgatactgttgaaatggacaagttaatgggtgat
ggtttagttgcaaaagcaagaaatgcctgtgatgttgtgactccccttgctcacatgtcc
tatgctgatcagttggaacacaagaagaactcactaatgcaaactcttaaaaaacttact
cgtaatgcacgtaaagcttgtccagaaggtattcctctcccagaatggattctcaagtct
agggatataggtggtcttccatgcaaactcgagggaatacttgagtcaccacttgtaaat
ggatatcgaaataagtgtgaattctcagttggatattcttttatggggaaaccaactgtg
ggctttatgattggaaactttagggacggtgtaactgcagtagaggaacctgtggactgc
ccaaatatttctaaaatagcttgcaagtttgctgctatctttcaggagtttctacagcat
tcaagcttaccattgtggaacagaatcaataatactggcttctggcgtcaattaacagtt
agggaaggcaggagtccaggcgagacaattgaggttgcagctctcgagtccaatatttca
gaagttatgcttatgattcaggtttgctcatcaggctttgatgatgaattagtaacaact
gaatttgagagaatggctcaaagtcttgctcttgaagctgctgaaagttctccccctcta
cctctaacagtgttggtagttcaggaccacacaggaatatcaaatgctgcaccagttgat
gctccattgcgtacactatccataacaaaggcagaaaccacttctggtccagatgccaat
gatatcactgttgaagctagaattcatgattacattagcaaccttcgcttcagcatatct
ccaactgcattttttcaagtcaacacccttgctgcagaaaagctgtattcacttgctggg
gattgggcaggtttgggtcctgataccttgctttttgatatatgttgtgggactggaact
attggcctgactttagcacatcgagttggtatggttgttggcattgaaatgaatgcttct
gcagtttctgatgcacaaagaaatgcagagataaatggcataaagaactgcaggtttatc
tgtgcaaaggccgaagatgtgatgggatctttattgaaagagtatctaaatgtgccttcc
aagcaagatgaaagtcctcatgttatctctgaagataatggtaaagatgatttgcgtgat
ctagagaatcttgcatctgtggacaatggagcagatcttgaagagagcagaatccatgaa
ttaggtgatgatacaagttcttctggatgcccaaataatggtagtgaggaacttgaaggt
ccaattgagaggagctgcatttcagaagatacgagtaaaacagtgcagcaatataaagat
gtagttgccattgttgatcctccacgagttggacttcaccctgttgtgatcaaagcttta
cggactcatccacgtctgcgacgtcttgtttatatctcctgtaatcccgagagcttagtg
gcaaatgctattgagctctgcacaccatctaccaataaacctgagaaagggaacaagaac
aacaggggatggaggaaaatgagcagtgcaggtttggcacgacataggaccaagtccatg
cccagctcagagcctttccatcctgtcaaagcaatggctgttgatctcttcccacacact
caacactgtgaaatggttatgcttcttgagagattgtag

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